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Protein Overview: SPBC1348.08c, SP...

General Information:
Name(s) found: SPBC1348.08c [Sanger Pombe]
SPAC977.07c [Sanger Pombe]
Description(s) found:
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  • gi|8452766|emb|CAB94275.1| cell surface glycoprotein (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|74624894|sp|Q9P329.1|YI48_SCHPO RecName: Full=Putative cell agglutination protein C1348.08c/C977.07c; Flags: Precursor [NCBI NR]
  • gi|6742157|emb|CAB69629.1| cell surface glycoprotein (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113691|ref|NP_592779.1| glycoprotein (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113682|ref|NP_592770.1| glycoprotein (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • pir||T50279 hypothetical serine/threonin repeat protein [imported] - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • glycoprotein [Sanger Pombe]
  • Putative cell agglutination protein C1348.08c/C977.07c OS=Schizosaccharomyces pombe GN=SPBC1348.08c PE=2 SV=1 [Swiss-Prot]
  • HYPOTHETICAL THREONINE-RICH PROTEIN; SIMILAR TO SPAC1F8.06, AND SPAC8A4.02C; POSSIBLY S. POMBE SPECIFIC; PREDICTED N-TERMINAL SIGNAL SEQUENCE: Q9P329; [pompepVF.fasta]
  • HYPOTHETICAL SERINE-THREONINE REPEAT PROTEIN; POSSIBLY S. POMBE SPECIFIC; PREDICTED N-TERMINAL SIGNAL SEQUENCE: Q9P329; [pompepVF.fasta]
  • HYPOTHETICAL THREONINE-RICH PROTEIN; SIMILAR TO SPAC1F8.06, AND SPAC8A4.02C; POSSIBLY S. POMBE SPECIFIC; PREDICTED N-TERM SIGNAL SEQUENCE: Q9P329; [pompepV13]
  • Hypothetical threonine-rich protein [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • SPBC1348.08c protein (Spac1348.08c protein) (SPAC977.07c protein) [4896.FASTAC]
  • |||glycoprotein (predicted)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • ||SPAC1348.08c|glycoprotein (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • hypothetical serine/threonin repeat protein [Schizosaccharomyces pombe]gi|19113682|ref|NP_592770.1| hypothetical threonine-rich protein [Schizosaccharomyces pombe]gi|8452766|emb|CAB94275.1| SPBC1348.08c [Schizosaccharomyces pombe]gi|6742157|emb|CAB6962 [nrdb_11152004_Chlamydomonas]
  • ||SPAC1348.08c|glycoprotein |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • |||glycoprotein |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q9P329) Hypothetical threonine-rich protein [pompep4896_normal_reversed]
  • |||cell surface glycoprotein |Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • |||cell surface glycoprotein |Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBC1348.08c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC977.07c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC977.07c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC1348.08c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Putative cell agglutination protein C1348.08c/C977.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1348.08c PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 416 amino acids

    Gene Ontology:
    Cellular Component: external side of cell wall [TASLink to PubMed article]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: cell adhesion [TASLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFFLYFRTI FLIQLYFFNY STFGCSASST SVQSDTTNQV SVSCPKYTTI YTSGTSPDTK  60
   61 TIYPESTSTK SITTSTQSHS SPVIVVSTVG TVTETTISGS TEYTTTIPAE GITSGTVEIV 120
  121 EPTAGTVTET ITSGTLPFTT TLAQASGTVS GTVEIVSPKN NPTTVYSGTV ATTETFSSST 180
  181 VVVIPTAICD GVRGLEYAVY DYTISSSMNE FCYPKNGQTD VFAFNEPAYF GSSDLDQSSP 240
  241 LFTGVFSSTD DIPEWASSWY LPPYPPQASD MASTYCACKV IVYQFFLRIP ETDTYTLVVN 300
  301 NVDDVFFGWF GDKAISGWSN NNFDAYSYWH ESPNMGLGTV GMGNFTVGNY PEGYFLPVRF 360
  361 VVANGAYIGG FDFYFTSDST GPLATTSYSY TKTCTQQFLP FGQGNGGVNG PTEKLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..263] MSA 8.063994 View MSA. No confident structure predictions are available.
    2 View Details [264..416] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.40

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle