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Protein Overview: mit1

General Information:
Name(s) found: mit1 / SPBP35G2.10 [Sanger Pombe]
Description(s) found:
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  • gi|7573203|emb|CAB87372.1| SHREC complex subunit Mit1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|74625356|sp|Q9P793.1|MIT1_SCHPO RecName: Full=Chromatin remodeling factor mit1; AltName: Full=Mi2-like interacting with clr3 protein 1; AltName: Full=Snf2/Hdac-containing repressor complex protein mit1; Short=SHREC protein mit1 [NCBI NR]
  • gi|19112177|ref|NP_595385.1| SHREC complex subunit Mit1 [Schizosaccharomyces pombe] [NCBI NR]
  • SHREC complex subunit Mit1 [Sanger Pombe]
  • Chromatin remodeling factor mit1 OS=Schizosaccharomyces pombe GN=mit1 PE=1 SV=1 [Swiss-Prot]
  • ZINC FINGER PROTEIN; ZF-PHD FINGER; HELICASE C SNF2 DOMAIN: Q9P793; [pompepVF.fasta]
  • HELICASE C PROTEIN WITH SNF2 DOMAIN: Q9P793; [pompepV13]
  • Helicase C protein with SNF2 domain [pompep4896]
  • |||zinc finger protein [pompepnew.fasta]
  • SPBP35G2.10 protein [4896.FASTAC]
  • |||zinc finger protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • helicase C protein with SNF2 domain [Schizosaccharomyces pombe]gi|7573203|emb|CAB87372.1| SPBP35G2.10 [Schizosaccharomyces pombe] [nrdb_11152004_Chlamydomonas]
  • (Q9P793) Helicase C protein with SNF2 domain [pompep4896_normal_reversed]
  • |mit1||SHREC complex subunit Mit1|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBP35G2.10 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBP35G2.10 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Chromatin remodeling factor mit1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mit1 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 1418 amino acids

    Gene Ontology:
    Cellular Component: mating-type region heterochromatin [IDALink to PubMed article]
    nucleus [ICLink to PubMed article][IDALink to PubMed article]
    telomeric heterochromatin [IDALink to PubMed article]
    nuclear chromatin [IC]
    NuRD complex [IDALink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    rDNA heterochromatin [IDALink to PubMed article]
    chromatin remodeling complex [ISSLink to PubMed article]
    centromeric heterochromatin [IDALink to PubMed article]
    Biological Process: negative regulation of transcription from RNA polymerase II promoter [IMPLink to PubMed article]
    chromatin remodeling [ISSLink to PubMed article]
    chromatin silencing at centromere [IMPLink to PubMed article]
    chromatin silencing at rDNA [IMPLink to PubMed article]
    nucleosome positioning [IMPLink to PubMed article]
    chromatin silencing [IMPLink to PubMed article]
    chromatin silencing at silent mating-type cassette [IMPLink to PubMed article]
    Molecular Function: ATPase activity [IDALink to PubMed article]
    ATP binding [IDALink to PubMed article][ISSLink to PubMed article]
    DNA binding [IEA]
    DNA-dependent ATPase activity [ISSLink to PubMed article]
    zinc ion binding [IEA]
    ATP-dependent DNA helicase activity [ISSLink to PubMed article]
    small conjugating protein ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKEDDSLCK IVVRREPLDV LLPYYDASET TVQKILHEND STLSVKFLAG VEALIKKDEL  60
   61 DKYKNGKACL RVWLKHKSRK RYHGYMTSTD KDEEEKNDYL LKSNGSKVLR DSTRTKKFKF 120
  121 GKEFHCALNP SFVSDETASD SATSSSSDTN KKVNRKEHNE LSLSHLSFND TSDFGSSDLS 180
  181 SSEIESTEND NKAPYFSLLY SDGFDFIKFL HVCVCVKCHG REHRSSGKNF VYCDHCSNVY 240
  241 HYDCSPLPSL NKETRNYSQQ NGFICPLCSK NSKDVLCNTG FVSGVSSGQD LVIPPSLADR 300
  301 ESLSILVNYC KSIRFRCFRC RRVEYFFYLD SNPLSIQRTI THFIKKLVCN ECSMHPCDIE 360
  361 EIIAWRTLNS LYPSKATLSN NFVSTSDLSF WSREYFVRSK GKSYLHCFWC SASWLAGISL 420
  421 AKKKNFDGLE NASYDATKPI IPVSYTIIDK VWDVQYRSGK NARTAKYKTK KHQLKAISEV 480
  481 TFAFVSWRGL TYYMSNWEPP PKETDRNRWK AWLKGYSDLL ECLWIEKAPT ASINIDLPFT 540
  541 NLEWHSQPSF IKGGTLMPYQ LKGLNWLYLR WYTHHPCILA DEMGLGKTVQ VISFISVLFY 600
  601 RHKCFPVLVI VPHATVANWE RELKKWAPFL QINVLVGSEK NRSLVRDYRL INQKDPKHVS 660
  661 THVLVISASN VEREISLLRK FQWKVLIVDE GQRLKNDQSS LFYYLSSVKS DFKLLLTGTP 720
  721 LQNNVRELFN LLQFLNPMKI NAAELEKRYS IIDTEKVTEL HQILKPFFLR RVKSEVLDNF 780
  781 PTKVEVIIPL SMTPVQKGLY KSILSKNLSL LRNITGYANT SSSGGQRTTS LNNILMQLRK 840
  841 TLAHPYIYSP DIEDRNLPYE LAMRSLEEAS CKFLILRLLV PKLITRGHRI LLFSQFIQQL 900
  901 DILEDWFEYK NIAYARFDGA SSEMERQSAI DSFNAPNSEL SCFLLSTRAG GVGINLASAD 960
  961 TVIILDPDFN PHQDMQAIAR AHRYGQKKKV LVFVLTTRDS VEEKIIQNAQ KKLVLDHLIV1020
 1021 ESLDQNHNSE KDLESILRHG ARALFEEAGD EPSIKYNEYS VELLISEAEK QEDTSTDESD1080
 1081 IKSNKFGFFR VWDNKHISSN HYEVKENVLV DEEDVWSVIL KQREKDAMLE KTDETTSNRR1140
 1141 LRAHHKIHYG EDLNIYDNSD DTDYTVNDRS SPGSPFPIET ETISSITDTL SDKQKLKYDS1200
 1201 SVNIENLNDE SDSQKSADVH FDSILAKSLL ATTPKEDEFN KTLSTINLEV ANKLTSSEYI1260
 1261 NDSEMQLIDD PVFYPPYEII EKNHQLVGRS LSKAVLDNFF LLSSLSDNVR CRCCGIKHLP1320
 1321 AHCPLSIVPL EICFLCGTPH FSGRDTCPML RNKEAIYRLK DSLSKSREPF HIKKQAMARL1380
 1381 NSFLQKKEEP TVSSSAKTNE LSSKVIIKES IINEAKTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle