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Protein Overview: rsm23

General Information:
Name(s) found: rsm23 / SPBC29A3.15c [Sanger Pombe]
Description(s) found:
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  • pir||T40086 hypothetical protein SPBC29A3.15c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74582205|sp|O59677.1|RT23_SCHPO RecName: Full=37S ribosomal protein S23, mitochondrial; Flags: Precursor [NCBI NR]
  • gi|3006151|emb|CAA18392.1| mitochondrial ribosomal protein subunit S23 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112635|ref|NP_595843.1| mitochondrial ribosomal protein subunit S23 [Schizosaccharomyces pombe] [NCBI NR]
  • mitochondrial ribosomal protein subunit S23 [Sanger Pombe]
  • 37S ribosomal protein S23, mitochondrial OS=Schizosaccharomyces pombe GN=rsm23 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE MITOCHONDRIAL RIBOSOMAL SMALL SUBUNIT; REQUIRED FOR RESPIRATION; REQUIRED FOR MITOCHONDRIAL MAINTENANCE; SIMILAR TO S. CEREVISIAE RSM23; CONTAINS MYC- TYPE 'HELIX-LOOP-HELIX' DIMERIZATION DOMAIN: O59677; [pompepVF.fasta]
  • PUTATIVE COMPONENT OF THE MITOCHONDRIAL RIBOSOMAL SMALL SUBUNIT; REQUIRED FOR RESPIRATION AND MITOCHONDRIAL MAINTENANCE; PUTATIVE ATPASE; BY SIMILARITY TO S. CEREVISIAE RSM23; CONTAINS MYC-TYPE 'HELIX-LOOP-HELIX' DIMERIZATION DOMAIN: O59677; [pompepV13]
  • Putative mitochondrial carrier protein [pompep4896]
  • |||putative mitochondrial ribosomal small subunit [pompepnew.fasta]
  • SPBC29A3.15c protein [4896.FASTAC]
  • |||mitochondrial ribosomal protein small subunit|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • Putative mitochondrial carrier protein, required for respiration and mitochondrial maintenance by similarity to yeast YGL129C [Schizosaccharomyces pombe]gi|3006151|emb|CAA18392.1| SPBC29A3.15c [Schizosaccharomyces pombe]gi|7491561|pir||T40086 hypothetic [nrdb_11152004_Chlamydomonas]
  • |rsm23||mitochondrial ribosomal protein subunit s23|Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O59677) Putative mitochondrial carrier protein [pompep4896_normal_reversed]
  • |rsm23||mitochondrial ribosomal protein subunit S23|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC29A3.15c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC29A3.15c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |rsm23||mitochondrial ribosomal protein subunit S23 |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • 37S ribosomal protein S23, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rsm23 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 476 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial small ribosomal subunit [ISSLink to PubMed article]
    Biological Process: mitochondrial translation [RCALink to PubMed article]
    translation [ISSLink to PubMed article]
    Molecular Function: ATP binding [IEA]
    structural constituent of ribosome [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPKFRSRSS IIKNTERISN ILSGGKLTVC GSKLGGLYTF EKCTFNKYYS SSQYQHTGRP  60
   61 VGGNIHSSSN QQRQKNSEAP RINEIPPSTS SVEKSTTIPN SSVVLDHLLN EGENTLEEVK 120
  121 PSEIHPHMSW SSKSEGKMFK IPEELLNKLN GFGALEKQKK SFSFFTSASL LHRKITTELV 180
  181 NVLQRSKDQG TKDGRFLLDG APGSGRSIAL IQAELFALSQ PNFIVLPVHN CEGWVNSTSS 240
  241 YGYDEQLKLW VQPDLIKGFL TSVMKTNSDK LKKLKTFESH ELLQNECIPA GTDLLSFLHK 300
  301 LIASSNAPKS LEIFLQELNN NTKSNSNMKV LLVIDNISIL SVVTKYKDKK NNFLPPKDFY 360
  361 FINLLFKYIS GSLTFNRGTV LAATSSQPRV STPSLDIALG VAHRNPYKSS DETILDSLQS 420
  421 VHILNMEPYT LDESRRMMEY LVSSNVCLEK VDNYLQNHVL SGGNPRKFFD ACTRLA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] deduced N/A No confident structure predictions are available.
    2 View Details [114..163] MSA 1.040993 View MSA. No confident structure predictions are available.
    3 View Details [164..407] MSA 2.04598 View MSA. No confident structure predictions are available.
    4 View Details [408..476] MSA 1.041987 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle