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Protein Overview: vps29

General Information:
Name(s) found: vps29 / SPAC15E1.06 [Sanger Pombe]
Description(s) found:
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  • pir||T37721 VPS29-like phosphoesterase-related protein SPAC15E1.06 [similarity] - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74638895|sp|Q9UTI5.1|VPS29_SCHPO RecName: Full=Vacuolar protein sorting-associated protein 29 [NCBI NR]
  • gi|5725411|emb|CAB52425.1| retromer complex subunit Vps29 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19115219|ref|NP_594307.1| retromer complex subunit Vps29 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • retromer complex subunit Vps29 [Sanger Pombe]
  • Vacuolar protein sorting-associated protein 29 OS=Schizosaccharomyces pombe GN=vps29 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE VACUOLAR SORTING PROTEIN: Q9UTI5; [pompepVF.fasta]
  • Similar to yeast vacuolar sorting protein VPS29/PEP11 [pompep4896]
  • |vps29||metallophosphatase [pompepnew.fasta]
  • Vps29 protein (Spac15e1.06 protein) [4896.FASTAC]
  • |vps29||metallophosphatase|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • similar to yeast vacuolar sorting protein VPS29/PEP11 [Schizosaccharomyces pombe]gi|5725411|emb|CAB52425.1| SPAC15E1.06 [Schizosaccharomyces pombe]gi|7493606|pir||T37721 VPS29-like phosphoesterase-related protein SPAC15E1.06 [similarity] - fission yeast [nrdb_11152004_Chlamydomonas]
  • (Q9UTI5) Similar to yeast vacuolar sorting protein VPS29/PEP11 [pompep4896_normal_reversed]
  • |vps29||retromer complex subunit Vps29|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC15E1.06 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC15E1.06 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Vacuolar protein sorting-associated protein 29 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps29 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 187 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    endosome [IMPLink to PubMed article][ISSLink to PubMed article]
    retromer complex [IMPLink to PubMed article][ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: ascospore formation [IMPLink to PubMed article]
    intracellular protein transport [IMPLink to PubMed article]
    retrograde transport, endosome to Golgi [IMPLink to PubMed article]
    Molecular Function: hydrolase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVLVIGDFH IPDRAPKLSE KFRQLLIPGK ISQIICLGNL TSTSVYEYLK HVCSDLKLVK  60
   61 GAFDISSKAP IAGKITLGSF KIGYTNGHLV VPQDSPEALS ILAREMDADI LLFGGTHKFA 120
  121 AYELDGCFFV NPGSATGAPN VSAVEDDEKI VPSFVLMDVQ GAVLILYVYR IFDGEVRVEK 180
  181 MQYRKPE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] PSI-BLAST 46.09691 Crystal Structure Of human Vps29

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  2.15398287574737 bayes_pls_golite062009
  • protein transporter activity
    		•  1.31841400137462 bayes_pls_golite062009
  • transporter activity
    		•  1.24767072239634 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  1.23826159413064 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.13357344565764 bayes_pls_golite062009
  • protein serine/threonine phosphatase activity
    		•  1.09206313505563 bayes_pls_golite062009
  • phosphatase activity
    		•  1.08894272596476 bayes_pls_golite062009
  • binding
    		•  1.0086165150304 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.783004917746429 bayes_pls_golite062009
  • phosphoprotein phosphatase activity
    		•  0.521298686118866 bayes_pls_golite062009
  • protein binding
    		•  0.306836734324834 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle