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Protein Overview: SPBC1709.09

General Information:
Name(s) found: SPBC1709.09 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • mitochondrial translation termination factor [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 244 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article][IGILink to PubMed article]
    Biological Process: positive regulation of translational termination [ICLink to PubMed article]
    mitochondrial translation [RCALink to PubMed article]
    translation [ISSLink to PubMed article]
    Molecular Function: translation termination factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRIISKATL FQDSQRFHTS ILSPRCAFHN GGILHKKAKD KDVKHDHDPE FANSFNKMLK  60
   61 SFEAKMQLVH EKLAKRFQEA VVLPSQGNFT QLEALFIPSK SIKAPTPSRL LREIAAVSQK 120
  121 GSQQIIIRPF EDVDIKNILK AIEDSRYPFV ANKLNASTIE VKPQRTTLES RQQLAKVLEG 180
  181 YAKDSREQLS AMRTELKKEI AKNKKSKAWT SDDCYKAEAE MQTAFKNAIN LLDSGLKSAL 240
  241 KKVI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..244] PSI-BLAST 62.0 Ribosome recycling factor, RRF

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation regulator activity
    		•  4.3587179630028 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  4.16037247039451 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.46266898174641 bayes_pls_golite062009
  • binding
    		•  2.50924072655137 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle