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Protein Overview: SPBC947.07

General Information:
Name(s) found: SPBC947.07 [Sanger Pombe]
Description(s) found:
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  • pir||T40775 ribosome biosynthesis protein surf homolog - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74582172|sp|O43082.1|RR14C_SCHPO RecName: Full=Ribosomal RNA-processing protein 14-C; AltName: Full=Ribosome biogenesis protein rrp14-C [NCBI NR]
  • gi|2894294|emb|CAA17035.1| ribosome biogenesis protein Rrp14-C [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112061|ref|NP_595269.1| ribosome biogenesis protein Rrp14-C [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • ribosome biogenesis protein Rrp14-C [Sanger Pombe]
  • Ribosomal RNA-processing protein 14 OS=Schizosaccharomyces pombe GN=rrp14 PE=1 SV=1 [Swiss-Prot]
  • Ribosomal RNA-processing protein 14-C OS=Schizosaccharomyces pombe GN=rrp14c PE=1 SV=1 [Swiss-Prot]
  • POSSIBLE INVOLVEMENT IN RIBOSOME BIOSYNTHESIS; SURF-LIKE; SIMILAR TO S. CEREVISIAE YKL082C: O43082; [pompepVF.fasta]
  • POSSIBLE INVOLVEMENT IN RIBOSOME BIOSYNTHESIS SURF-LIKE: O43082; [pompepV13]
  • Possible involvement in ribosome biosynthesis surf-like [pompep4896]
  • |||possibly involved in ribosome biogenesis [pompepnew.fasta]
  • SPBC947.07 protein [4896.FASTAC]
  • |||involved in ribosome biogenesis and assembly (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • possible involvement in ribosome biosynthesis surf-like [Schizosaccharomyces pombe]gi|2894294|emb|CAA17035.1| SPBC947.07 [Schizosaccharomyces pombe]gi|7493322|pir||T40775 ribosome biosynthesis protein surf homolog - fission yeast (Schizosaccharomyces p [nrdb_11152004_Chlamydomonas]
  • |||surf-like|Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O43082) Possible involvement in ribosome biosynthesis surf-like [pompep4896_normal_reversed]
  • |||ribosome biogenesis protein Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • surf-like protein [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC947.07 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |||ribosome biogenesis protein Rrp14-C |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Ribosomal RNA-processing protein 14-C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rrp14c PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 233 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: ribosomal large subunit biogenesis [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METTEGKNDL RAKLAEKIQT FRSQRKATEK VDRALLLQRR KEKAKARAEA KKLAKKESKA  60
   61 KQESKVAAYD TGNSSDNIAD EENDNHKSTI TYGTLIVGDD KFSNGKLKVA GKKRGPTDVF 120
  121 GALKHLEAKK RRIESMDEEK RRKIEESDKW HRVLLQAEGK KLKDNEQLLK KSIRRKEKEK 180
  181 KKSSDAWKER KDNEKKAMLM RQQRREENLK KRRESKKSKK GKAPKKKKPS KKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74] deduced N/A No confident structure predictions are available.
    2 View Details [75..233] PSI-BLAST 3.30103 No description for 2i1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle