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Protein Overview: SPAC6G10.05c

General Information:
Name(s) found: SPAC6G10.05c [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • TRAPP complex subunit Trs120 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1210 amino acids

    Gene Ontology:
    Cellular Component: TRAPP complex [ISSLink to PubMed article]
    cell division site [IDALink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    Biological Process: ER to Golgi vesicle-mediated transport [ISSLink to PubMed article]
    intracellular protein transport [ICLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFDFFSFVA PSRVQSLVLP FGRVRRKSFS SYLQLLRRVS HIQLSDVPVA TATRKSSSFN  60
   61 PLAFPLGRLV YNFLTSLDDQ QALLEEFEYF RRVFVLIGIV DGSEEQEVEQ LCSTLDVWRR 120
  121 RIPHALVAKC IVFNCPEDKE NIFNAPNIII GPRSDFSINS VMRSILCDIT AELLEGFSSL 180
  181 EFSIHARSVI LSPITDMPHL APLQRKNSNA SIHSLGSSSR PTLTRTPSIT SRSVNSVTER 240
  241 SKSLSKGRIE NQFGQLYLLA GRVPNALKHF STAIALSKAT GDFLWQGLSL ELFTVCLVIM 300
  301 AHLHVDVQIP PNILSMFPSY NDRLNAFGPL KFDALLNFIT EMRNVVDQLY QKSTLQPNDA 360
  361 VPGLCFSESI LRYAHLLTVV YSCKGFNDNA LDHIIAQAPI RPVKKATTYV PNKATICQWI 420
  421 MRAQGQHLNS LSIRERCRIY GAMANMLGSI GFSRLRVKML RELVASLTPV LLETRRQNAS 480
  481 KNGIHPEVIA SHTAQSFKST HYCNILPLIS EICQEYGLLK TDGSLLNPEL TKWGWSNLQF 540
  541 DVLNELISLC DSLSDYRSIL LLISLFFLTS VQTASSSQQI SMFKAFRKTY LFASNAGIHI 600
  601 NAPYWDPFMI TDLKFIGSSE NAELIHQRLR NGLPKSIEKG PFIYNPFNRR QDQNQSKSVL 660
  661 VVDEQVAFSI YFRNPLSVSV EVQDVHLETK GVSAKCSHST FTMRPLSIER TTLTVTPTET 720
  721 GELHIVGCRV KVFGCEPILQ YVYEAKDKHK SLHVYLEKSK DVNAELRSLD TIDHLWTYFP 780
  781 FKKDLKTKSF DCIVIASQPK LSLAFQNLTS GKFNFAEYET GELVYVIENT SFVEASHISV 840
  841 LFEDSSSKAF EQAIADKSIT ADRLYELQFE EFNLPTFTVE SSQPFSLSPG ERREIHIKIR 900
  901 AKPNSQEGLI LFESSVHKPE DTEFYVRRLR IPVSLNISKR VDLKQWSAFM DTEGDPSYCL 960
  961 VLLNFYNHFS EPLFVTVKTA STDESRSVLI KPKADNVILF RLKRFIMSSE EINLDIPNLS1020
 1021 TKQFVLSSGF KKSIEDSYTM KKRFWIKEYF LKEVQASWKT DDNLHHGEIY LRNHILSDEM1080
 1081 ANNLSILPIR IQAWVSYDSE KVTTVCPREP FKLVLEFFGH ADTNMRYKIS WTQLNTQANT1140
 1141 SSFNGLILDG PEEDIVCFNN SKCHVVIERN MFAYTTGMYN IFVRIFNEEL QLLSQPVDLD1200
 1201 EPILLIVDAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..197] Pfam 85.251812 No description for PF08626.2 was found. No confident structure predictions are available.
    2 View Details [198..327] MSA 1.041995 View MSA. No confident structure predictions are available.
    3 View Details [328..526] deduced N/A No confident structure predictions are available.
    4 View Details [527..663] deduced N/A Confident ab initio structure predictions are available.
    5 View Details [664..993] FFAS03 1.07 No description for 2qsvA was found.
    6 View Details [994..1121] MSA 1.041971 View MSA. No confident structure predictions are available.
    7 View Details [1122..1210] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.66

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle