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Protein Overview: SPBC29A3.03c

General Information:
Name(s) found: SPBC29A3.03c [Sanger Pombe]
Description(s) found:
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  • pir||T40074 hypothetical zf-C3HC4 zinc finger protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74626734|sp|O59668.1|YB83_SCHPO RecName: Full=LisH domain-containing protein C29A3.03c [NCBI NR]
  • gi|3006139|emb|CAA18380.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112623|ref|NP_595831.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • ubiquitin-protein ligase E3 [Sanger Pombe]
  • LisH domain-containing protein C29A3.03c OS=Schizosaccharomyces pombe GN=SPBC29A3.03c PE=2 SV=1 [Swiss-Prot]
  • ZINC FINGER PROTEIN; CC3HC4 TYPE (RING FINGER): O59668; [pompepVF.fasta]
  • HYPOTHETICAL ZF-C3HC4 ZINC FINGER PROTEIN: O59668; [pompepV13]
  • Hypothetical zf-C3HC4 zinc finger protein [pompep4896]
  • |||zinc finger protein [pompepnew.fasta]
  • SPBC29A3.03c protein [4896.FASTAC]
  • |||zinc finger protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • hypothetical zf-C3HC4 zinc finger protein [Schizosaccharomyces pombe]gi|3006139|emb|CAA18380.1| SPBC29A3.03c [Schizosaccharomyces pombe]gi|7492078|pir||T40074 hypothetical zf-C3HC4 zinc finger protein - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • (O59668) Hypothetical zf-C3HC4 zinc finger protein [pompep4896_normal_reversed]
  • |||ubiquitin-protein ligase E3 |Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC29A3.03c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC29A3.03c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • LisH domain-containing protein C29A3.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC29A3.03c PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 398 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article][ISSLink to PubMed article]
    GID complex [ISS]
    Biological Process: proteasomal ubiquitin-dependent protein catabolic process [IC]
    negative regulation of gluconeogenesis [ISSLink to PubMed article]
    cellular response to stress [IEPLink to PubMed article]
    protein ubiquitination [ISSLink to PubMed article]
    Molecular Function: ubiquitin-protein ligase activity [ISSLink to PubMed article]
    zinc ion binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIDEWQRIE ETAPGNKCLA KLNELESILK DAKKSCLKDP TTSMKELVAC SEKTQQVFDD  60
   61 LKRTEKKFHT SLNRFGKTLE KKFNFDLEDI KLHSSFESKK REIDTALSLH FFRQGDVELA 120
  121 HLFCKEAGIE EPSESLHVFT LLKSIVQGIR DKDLKLPIEW ASQCRGYLER KGSSLEYTLQ 180
  181 KYRLVSNYLT TKDIMAAIRY CRTNMAEFQK KHLADIQKTM IALFFCSRNE VLSGTNDSHD 240
  241 SIHHIISNNA QLNIPQEYID VLDLDWKSLE LLFVREFCAA LGMSLESPLD IVVNAGAIAL 300
  301 PILLKMSSIM KKKHTEWTSQ GELPVEIFLP SSYHFHSVFT CPVSKEQATE ENPPMMMSCG 360
  361 HVIVKESLRQ LSRNGSQRFK CPYCPNENVA ADAIRVYF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [87..258] MSA 12.198993 View MSA. No confident structure predictions are available.
    3 View Details [259..398] PSI-BLAST 5.522879 Cbl; N-terminal domain of cbl (N-cbl); CBL


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle