Protein Overview: sec65

General Information:
Name(s) found:	sec65 / SPCC126.15c [Sanger Pombe]
Description(s) found: SHOW ONLY BEST	pir\|\|T40919 probable signal recognition particle subunit - fission yeast (Schizosaccharomyces pombe) [NCBI NR] gi\|52783342\|sp\|O94407\|SEC65_SCHPO Signal recognition particle sec65 subunit [NCBI NR] gi\|4008563\|emb\|CAA22484.1\| signal recognition particle subunit Sec65 (predicted) [Schizosaccharomyces pombe] [NCBI NR] gi\|19075958\|ref\|NP_588458.1\| signal recognition particle subunit Sec65 (predicted) [Schizosaccharomyces pombe] [NCBI NR] signal recognition particle subunit Sec65 [Sanger Pombe] Signal recognition particle sec65 subunit OS=Schizosaccharomyces pombe GN=sec65 PE=2 SV=1 [Swiss-Prot] (O94407) Signal recognition particle sec65 subunit [Swiss-Prot] PUTATIVE SIGNAL RECOGNITION PARTICLE SUBUNIT: O94407; [pompepVF.fasta] Putative signal recognition particle subunit [pompep4896] \|sec65\|\|putative signal recognition particle subunit [pompepnew.fasta] Signal recognition particle sec65 subunit [4896.FASTAC] \|sec65\|\|protein signal sequence binding activity (predicted)\|Schizosaccharomyces pombe\|chr 3\|\|\|Manual [pombe041504.fasta] putative signal recognition particle subunit [Schizosaccharomyces pombe]gi\|4008563\|emb\|CAA22484.1\| SPCC126.15c [Schizosaccharomyces pombe]gi\|7492975\|pir\|\|T40919 probable signal recognition particle subunit - fission yeast (Schizosaccharomyces pombe)gi\| [nrdb_11152004_Chlamydomonas] \|sec65\|\|protein signal sequence binding activity \|Schizosaccharomyces pombe\|chr 3\|\|\|Manual [pompep2242005.fasta] (O94407) Putative signal recognition particle subunit [pompep4896_normal_reversed] \|sec65\|\|signal recognition particle subunit Sec65 \|Schizosaccharomyces pombe\|chr 3\|\|\|Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta] hypothetical protein SPCC126.15c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta] SPCC126.15c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
Organism:	Schizosaccharomyces pombe
Length:	199 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] cytosol [IDA] signal recognition particle, endoplasmic reticulum targeting [ISS]
Biological Process:	SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition [ISS]
Molecular Function:	RNA binding [IEA] 7S RNA binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSIILYPIY FDKSRPRRFR CVPKDKAILN PLAKNIADVV RDLGYKCKLE PLKTHPADWV  60
   61 NPGRVEMVLP EKIQKKYVIN EIAKVLLLRP TVKTDPLSLP IQNVPARLPE NPPAYPKGVL 120
  121 GNTILPLHSP ALSGGGISEN MFQEMMQEMQ KQPGLAGGMN PMAALAGMGG PAPPMPTPQA 180
  181 SSSQRKQKSI EPEYDLDLE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..100]	PSI-BLAST	28.154902	SRP19
2	View Details	[101..199]	deduced	N/A	No confident structure predictions are available.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.64

Protein Overview: sec65

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: