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Protein Overview: SPBC1683.04

General Information:
Name(s) found: SPBC1683.04 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • glycosyl hydrolase family 3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 832 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Biological Process: carbohydrate catabolic process [ICLink to PubMed article]
    cellular catabolic process [NAS]
    Molecular Function: beta-glucosidase activity [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEHDVEDLI NQLDISEKAM LLSGTDLWHT AAIPRLNIPS IRLSDGPNGI RGTSFFNSSP  60
   61 SACFPCGTAL GATFDKKLLF EVGEYLAEEA KAKGVSVVLG PTVNIHRGPL NGRGFESFSE 120
  121 DSTLSGLAAS YVILGLQSKN VQACIKHFVC NDMEDERNSV SIDVSQRALR EVYLMPFQLA 180
  181 CKYSNFKSLM TSYNKVNGEH VSQSRILLDN ILRKEWEWKG TIISDWFGTY SLKKAIDAGL 240
  241 DLEMPGKPRF RNVNTIQHLV GSKELSESIL DERAKNVLKL VKHSWQNTEA ENHCELNNDS 300
  301 SCLREALKKF ASQSIVLLKN KKKLLPLSRK GTFAVIGPNA KVCNYSGGGS ANLKPYYTVS 360
  361 MYDGIAAKID GVPEYALGCH NYLNLPNIAN LLVNPRTGKH GYVAKFYLEP ATSENRTLID 420
  421 DYDLEDGVVR FYDYCNDKMK DGYFYIDIEG YLIPDEDAVY EFGISVFGTA LLFIDDVLLI 480
  481 DNKTKQTPTN HTFEFGTIEE RNSIYLKKGR KYNVRVEYGS AATYTLSTNL SPSTGGRYSI 540
  541 GCVKVIDPET EIDYAVRVAK SVDCVILCVG LTAEWETEGE DRKTMTLPSL SDKLVYSILQ 600
  601 SNPNTVVVTQ SGTPIEMPWI SEAHTLLHIW YNGNELGNAL ANIIFGEQNP CGKLPITFPK 660
  661 KLKDNPAYLS FRSSRGHCVY GEDVFVGYKY YEAVEREVLF PFGYGLSYTT FELSNLYLKN 720
  721 CGERLRIDLE ISNTGPMSGA EIIQVYISQI VRSVNRPVKE LKEFSKVVLC PKETKLIRIE 780
  781 LDIKYATSFY DELNEKWCSE EGEYNVLVGT SSKDIALTGK FTLPKTIHWT GL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..415] PSI-BLAST 95.39794 Beta-D-glucan exohydrolase, N-terminal domain; Beta-D-glucan exohydrolase, C-terminal domain
    2 View Details [416..710] FFAS03 3.77 Beta-D-glucan exohydrolase, N-terminal domain; Beta-D-glucan exohydrolase, C-terminal domain
    3 View Details [711..832] FFAS03 3.06 Dex49A from Penicillium minioluteum

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  3.47174391073813 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  3.31382654930276 bayes_pls_golite062009
  • hydrolase activity
    		•  2.08746386980684 bayes_pls_golite062009
  • catalytic activity
    		•  1.85569074294201 bayes_pls_golite062009
  • glucosidase activity
    		•  0.766503513427695 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.763360027922833 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.266938437560648 bayes_pls_golite062009
  • beta-N-acetylhexosaminidase activity
    		•  0.263065978664289 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle