YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC1683.04
Organism:	Schizosaccharomyces pombe
Length:	832 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC1683.04.

Description	E-value	Query Range	Subject Range
BGLI_ASPFU - Probable beta-glucosidase I OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGS...	846.0	[0..1]	[832..1]
gi\|95025704 - gi\|95025704\|gb\|ABF50853.1\| putative beta-glucosidase [Emericella nidulans]	837.0	[0..1]	[832..1]
gi\|42547068, gi\|... - gi\|46111501\|ref\|XP_382808.1\| hypothetical protein FG02632.1 [Gibberella zeae PH-1], gi\|42547068\|gb\|E...	834.0	[0..1]	[832..1]
gi\|83771850 - gi\|83771850\|dbj\|BAE61980.1\| unnamed protein product [Aspergillus oryzae] BGLI_ASPOR - Probable beta-glucosidase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=bglI PE=3 SV=1	831.0	[0..1]	[832..1]
gi\|31747168 - gi\|31747168\|gb\|AAP57756.1\| Cel3c [Hypocrea jecorina]	830.0	[0..1]	[832..1]
gi\|67523543, gi\|... - gi\|67523543\|ref\|XP_659831.1\| hypothetical protein AN2227.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	827.0	[0..1]	[832..1]
gi\|145019368, gi... - gi\|39946006\|ref\|XP_362540.1\| hypothetical protein MGG_08123 [Magnaporthe grisea 70-15], gb\|EAA57154....	826.0	[0..1]	[832..1]
gi\|148569693, gi... - gi\|148657583\|ref\|YP_001277788.1\| glycoside hydrolase family 3 protein [Roseiflexus sp. RS-1], gi\|148...	824.0	[0..3]	[831..13]
gi\|50413562, gi\|... - gi\|50413562\|ref\|XP_457283.1\| hypothetical protein DEHA0B07491g [Debaryomyces hansenii CBS767], gi\|49...	822.0	[0..1]	[832..1]
BGLI_ASPTN - Probable beta-glucosidase I OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=bglI PE=3 SV=1	819.0	[0..1]	[832..1]

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Predicted Domain #1

Region A:
Residues: [1-415]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEHDVEDLI NQLDISEKAM LLSGTDLWHT AAIPRLNIPS IRLSDGPNGI RGTSFFNSSP  60
   61 SACFPCGTAL GATFDKKLLF EVGEYLAEEA KAKGVSVVLG PTVNIHRGPL NGRGFESFSE 120
  121 DSTLSGLAAS YVILGLQSKN VQACIKHFVC NDMEDERNSV SIDVSQRALR EVYLMPFQLA 180
  181 CKYSNFKSLM TSYNKVNGEH VSQSRILLDN ILRKEWEWKG TIISDWFGTY SLKKAIDAGL 240
  241 DLEMPGKPRF RNVNTIQHLV GSKELSESIL DERAKNVLKL VKHSWQNTEA ENHCELNNDS 300
  301 SCLREALKKF ASQSIVLLKN KKKLLPLSRK GTFAVIGPNA KVCNYSGGGS ANLKPYYTVS 360
  361 MYDGIAAKID GVPEYALGCH NYLNLPNIAN LLVNPRTGKH GYVAKFYLEP ATSEN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	95.39794
Match:	1ex1A
Description:	Beta-D-glucan exohydrolase, N-terminal domain; Beta-D-glucan exohydrolase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
hydrolase activity, hydrolyzing O-glycosyl compounds	3.47174391073813	bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds	3.31382654930276	bayes_pls_golite062009
hydrolase activity	2.08746386980684	bayes_pls_golite062009
catalytic activity	1.85569074294201	bayes_pls_golite062009
glucosidase activity	0.766503513427695	bayes_pls_golite062009
hexosaminidase activity	0.763360027922833	bayes_pls_golite062009
transferase activity, transferring hexosyl groups	0.266938437560648	bayes_pls_golite062009
beta-N-acetylhexosaminidase activity	0.263065978664289	bayes_pls_golite062009

Predicted Domain #2

Region A:
Residues: [416-710]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RTLIDDYDLE DGVVRFYDYC NDKMKDGYFY IDIEGYLIPD EDAVYEFGIS VFGTALLFID  60
   61 DVLLIDNKTK QTPTNHTFEF GTIEERNSIY LKKGRKYNVR VEYGSAATYT LSTNLSPSTG 120
  121 GRYSIGCVKV IDPETEIDYA VRVAKSVDCV ILCVGLTAEW ETEGEDRKTM TLPSLSDKLV 180
  181 YSILQSNPNT VVVTQSGTPI EMPWISEAHT LLHIWYNGNE LGNALANIIF GEQNPCGKLP 240
  241 ITFPKKLKDN PAYLSFRSSR GHCVYGEDVF VGYKYYEAVE REVLFPFGYG LSYTT

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	3.77
Match:	1ex1A
Description:	Beta-D-glucan exohydrolase, N-terminal domain; Beta-D-glucan exohydrolase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #3

Region A:
Residues: [711-832]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FELSNLYLKN CGERLRIDLE ISNTGPMSGA EIIQVYISQI VRSVNRPVKE LKEFSKVVLC  60
   61 PKETKLIRIE LDIKYATSFY DELNEKWCSE EGEYNVLVGT SSKDIALTGK FTLPKTIHWT 120
  121 GL

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	3.06
Match:	1ogmX
Description:	Dex49A from Penicillium minioluteum
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: