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Protein Overview: SPAC10F6.11c

General Information:
Name(s) found: SPAC10F6.11c [Sanger Pombe]
Description(s) found:
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  • pir||T37505 hypothetical protein SPAC10F6.11c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|73622262|sp|O42651.1|ATG17_SCHPO RecName: Full=Autophagy-related protein 17 [NCBI NR]
  • gi|2661616|emb|CAA15724.1| autophagy associated kinase activator (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19114174|ref|NP_593262.1| kinase activator (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • kinase activator [Sanger Pombe]
  • Autophagy-related protein 17 OS=Schizosaccharomyces pombe GN=atg17 PE=2 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE APG17; CONTAINS PFAM-B_36869; PREDICTED COILED-COIL: O42651; [pompepVF.fasta]
  • HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE APG17; CONTAINS PFAM-B_36869; PUTATIVE COILED-COIL: O42651; [pompepV13]
  • Hypothetical protein [pompep4896]
  • |||putative kinase activator [pompepnew.fasta]
  • SPAC10F6.11c protein [4896.FASTAC]
  • |||kinase activator (predicted)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|2661616|emb|CAA15724.1| SPAC10F6.11c [Schizosaccharomyces pombe]gi|7490763|pir||T37505 hypothetical protein SPAC10F6.11c - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||kinase activator |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (O42651) Hypothetical protein [pompep4896_normal_reversed]
  • |||autophagy associated kinase activator |Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPAC10F6.11c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC10F6.11c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Autophagy-related protein 17 [nr-271106-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 481 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    extrinsic to membrane [IEA]
    Biological Process: autophagic vacuole assembly [ISSLink to PubMed article]
    positive regulation of phosphorylation [ICLink to PubMed article]
    autophagy [IMPLink to PubMed article]
    regulation of catalytic activity [ICLink to PubMed article]
    macroautophagy [IC]
    cellular response to nitrogen starvation [IMPLink to PubMed article]
    Molecular Function: protein complex scaffold [ISS]
    protein kinase activator activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCYMRSLAIF QFRRKHTTLL HNQFLCIKGP FEKFVGRYIY KYISILIYLY SFFSSGVHTR  60
   61 GIQFYRVSAV MELLQQWTQQ AKAALTQARQ LCGDAHKFNE DAKTDLRNSI KQHQQLKELA 120
  121 KLTASQCTRL DSSTALIKQL LDLVQNYPTF NQLNVLHDRL ESSLKRLRDC TLDPALGSEY 180
  181 TNLYAFVDDT ALEDLKTRLR GVTDGVWNAF EKLAGLLEED LCANYHKRLE AVSLDFLPPA 240
  241 YNDTAEELAD LLLQVAQHYD QCSEALNIYD TLSDAEKKDL QEVLQSDSNH VPSVLTELRS 300
  301 GLDQTIHYFN AVQSYKSKVD SATSILEALA EELNKNQLTN QRHEAAHELM RAQTGLEIPQ 360
  361 LAQELVQLER HYTHFAKAYT ALLQEIHRRQ TYENCVRSIV DEFVGRLEKE QQAEAKCRID 420
  421 FFNQYGDYLP QTLWGAVTDP PLHFEIIEHQ YTELPNVKVI PDKNDKKSKQ REKSSTTASK 480
  481 R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..481] FFAS03 1.14 COLICIN IA


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.52

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle