YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPBC365.07c

General Information:
Name(s) found: SPBC365.07c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • TATA element modulatory factor homolog [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 547 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [ISSLink to PubMed article]
    regulation of transcription from RNA polymerase I promoter [ISSLink to PubMed article]
    Molecular Function: transcription cofactor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENSKWGGFL KKAMSNVETS IDKVLDGNQI EEMSRGNAKS KDEIIAKLLT EGQALSKNEL  60
   61 KLNNTIKQLK KSLSEAETKL KRLDEKQATP ELQVSDSKEM EEQLELQKSQ FEKRISILEK 120
  121 EKEDLQRKME ELTVESMEVV RLTRQVETLS TQYSIQRSQW VREDEKKKKE IQDLKELYEK 180
  181 SEHGAKNWER ERETFQNQVS QMSKQLDSLE KLCERKDEEI RSSQAFNMTL REENDTLAAQ 240
  241 NLDLQTQLDR LQRELDTNIR SNVKSKPKKI VTTGGIPENN DYTVGKVDTL KVTKEDEDPT 300
  301 TPTNAIPIPS SMSKRDEALE NDKDNYFDDL HPLNISTSPQ PSPLSFSEIP QSDTRNALEN 360
  361 FLDNLPSPSE ERSRISRSAS EARKLGINAQ SRYASISSAV LSPPSEASRK FSLYESEAIS 420
  421 PTSGTPSNLE KGAGNVPDVS LLEQLATTIR RLEAELQTTK QQVAQLIIQR DQARQEIVDA 480
  481 YVNNDANEDS KKQVEELRLQ LQNLEKEHAS TLVTLKQKSD KVFELELDIK DMRELYVSQI 540
  541 DILAGRQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..310] PSI-BLAST 19.39794 Heavy meromyosin subfragment
    2 View Details [311..427] PSI-BLAST 4.09691 No description for 2iw5A was found.
    3 View Details [428..547] FFAS03 1.5 Fibrinogen


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle