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Protein Overview: SPBC16E9.10c

General Information:
Name(s) found: SPBC16E9.10c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • AAA family ATPase Rix7 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 779 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    nucleolus [ISSLink to PubMed article]
    Biological Process: ribosomal large subunit export from nucleus [ISSLink to PubMed article]
    Molecular Function: ATPase activity [ISSLink to PubMed article]
    ATP binding [ICLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRSGTSLSR DLERKIHERL VSLKDTIQQT EIEEWPVSTR RAIQFVQERD MSLRRIKKPI  60
   61 LEKVVEKVLD TLKAEVEEKL ASSQDLVLVD SDMEEQSDSN LMEVKDTNVI NKSITSLWSS 120
  121 PNLKEIDGED EKKSVGQESI TGSAKRKDRR SKTNGSKRQK AEANREPPSD ISLSDIGGLD 180
  181 DCINELLELV AMPIKHPEVY QYTGIHPPRG VLLHGPPGCG KTMLANALAN ELGVPFISIS 240
  241 APSIVSGMSG ESEKKVREVF EEAKSLAPCL MFIDEIDAVT PKRESAQREM ERRIVAQFLT 300
  301 CMDELSFEKT DGKPVLVIGA TNRPDSLDSA LRRAGRFDRE ICLTVPSQDA REKILRTMAK 360
  361 GLKLSGDFDF RQLAKQTPGY VGADLKALTA AAGIIAIKRI FNEISPLNKL DLNSDPRFNE 420
  421 LDSDMALDSN DSLPLDHSSI IQRYLNAHPD PLSPEELEPL AICPQDFIEA LAKVQPSSKR 480
  481 EGFATVPGVS WNNIGALKSI RVELQMAIVQ PIKRPELYQS VGISAPTGVL LWGPPGCGKT 540
  541 LLAKAVANES KANFISIRGP ELLNKYVGES ERAVRQVFLR ARASSPCVIF FDELDAMVPR 600
  601 RDDSLSEASS RVVNTLLTEL DGLSDRSGVY VIAATNRPDI IDPAMLRPGR LDKTLLVDLP 660
  661 DAHERVEILK TLTKQTPLHE EVNLDVLGRD ERCSNFSGAD LAALVREAAV TALRSAVFAD 720
  721 IASNEPEITQ HSALEPIRVT NADFELAFKN IKPSVSDRDR QKYQRLAKRW SSASTNDAD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..779] PSI-BLAST 145.0 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle