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Protein Overview: SPBC4F6.11c

General Information:
Name(s) found: SPBC4F6.11c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • asparagine synthase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 548 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: asparagine biosynthetic process [IEA]
    aspartate metabolic process [RCALink to PubMed article]
    Molecular Function: asparagine synthase (glutamine-hydrolyzing) activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGILFALAE DRDNLLESPS FSALRKRIRA RGPDFFGKHK LNSGPWNLHF ESSVLHLRGP  60
   61 SDHLTPQPHV DSFGNVLCWN GEIWQINHSD HHKFTLNRNE NDGAKLFELL NNNPGDIEKI 120
  121 LGSIQGPFAF VYYQVRTNTL WWGRDRLGRR SLLYSLRDSN FVLSSVGNSS DFREVEPGFH 180
  181 SVQVDLIPKI NFSKSLMQLE KTNPLPPVDE SFLMGSISSD TVDTLHTYLI KALQDRVLTI 240
  241 PKLCSSNLDC SHYSRVCVLY SGGVDCGVLA RLMHDIVPNN ESIDLINVAF ENPRFTETYR 300
  301 DRETGLLPDN FDAYDVCPDR QTGLQGWQEL ISVCPARKWN FVAINVPYTE VCEAQEIVKT 360
  361 LIYPNDSVMD LSIGLAFYFA SQGRGVLLQN VDDIKLKHQL PSYTIKAKVL ISGLGADEQL 420
  421 GGYMRHLRAF ERKGMAGLEE ELQLDIDRIP HRNLGRDDRV MSNQGKEVRY PFLDERLMAL 480
  481 FSKMKTTDKM RLDLVGGDKL ILRELGRRLG CPLASQEKKR AIQFGSKAAK MTPGTGRTSG 540
  541 RKKLEVCI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..548] PSI-BLAST 98.69897 Asparagine synthetase B, C-terminal domain; Asparagine synthetase B, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.19663085909195 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.15443909453 bayes_pls_golite062009
  • DNA binding
    		•  0.992954560970173 bayes_pls_golite062009
  • binding
    		•  0.588559633560537 bayes_pls_golite062009
  • hydrolase activity
    		•  0.294277714465162 bayes_pls_golite062009
  • ligase activity
    		•  0.204093345072151 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.0940838340168359 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle