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Protein Overview: mrp17

General Information:
Name(s) found: mrp17 / SPAC343.08c [Sanger Pombe]
Description(s) found:
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  • pir||T38657 probable ribosomal protein, mitochondrial - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74625918|sp|Q9UT82.1|RT06_SCHPO RecName: Full=37S ribosomal protein MRP17, mitochondrial [NCBI NR]
  • gi|5706509|emb|CAB52271.1| mitochondrial ribosomal protein subunit Mrp17 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19114340|ref|NP_593428.1| mitochondrial ribosomal protein subunit Mrp17 [Schizosaccharomyces pombe] [NCBI NR]
  • mitochondrial ribosomal protein subunit Mrp17 [Sanger Pombe]
  • 37S ribosomal protein MRP17, mitochondrial OS=Schizosaccharomyces pombe GN=mrp17 PE=2 SV=1 [Swiss-Prot]
  • MITOCHONDRIAL RIBOSOMAL PROTEIN S6: Q9UT82; [pompepVF.fasta]
  • Mitochondrial ribosomal protein S6 [pompep4896]
  • |||mitochondrial ribosomal protein S6 [pompepnew.fasta]
  • SPAC343.08c protein [4896.FASTAC]
  • |||mitochondrial ribosomal protein S6|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • mitochondrial ribosomal protein S6 [Schizosaccharomyces pombe]gi|5706509|emb|CAB52271.1| SPAC343.08c [Schizosaccharomyces pombe]gi|7492917|pir||T38657 probable ribosomal protein, mitochondrial - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |mrp17||mitochondrial ribosomal protein subunit mrp17|Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q9UT82) Mitochondrial ribosomal protein S6 [pompep4896_normal_reversed]
  • |mrp17||mitochondrial ribosomal protein subunit Mrp17|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPAC343.08c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC343.08c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 109 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial small ribosomal subunit [ISSLink to PubMed article]
    Biological Process: mitochondrial translation [RCALink to PubMed article]
    translation [ISSLink to PubMed article]
    Molecular Function: structural constituent of ribosome [ISSLink to PubMed article]
    rRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYELFCITRP AANATRTSSP TLAMNIAKNC GRAILDNKGV VVDVESMGLK ELAKPIKKLN  60
   61 QSYSFGHWWS MTFYSNPTVQ SEIQRILRLE PSVLRYMIVK KADKLSDLM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] PSI-BLAST 28.0 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.72663177460478 bayes_pls_golite062009
  • structural molecule activity
    		•  9.15324307340032 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle