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Protein Overview: rsc7

General Information:
Name(s) found: rsc7 / SPCC1281.05 [Sanger Pombe]
Description(s) found:
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  • pir||T40924 nuclear localization protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74582913|sp|O94522.1|RSC7_SCHPO RecName: Full=Chromatin structure-remodeling complex subunit rsc7; AltName: Full=Remodel the structure of chromatin complex subunit 7 [NCBI NR]
  • gi|4160581|emb|CAA22826.1| RSC complex subunit Rsc7 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19075669|ref|NP_588169.1| RSC complex subunit Rsc7 [Schizosaccharomyces pombe] [NCBI NR]
  • RSC complex subunit Rsc7 [Sanger Pombe]
  • Chromatin structure-remodeling complex subunit rsc7 OS=Schizosaccharomyces pombe GN=rsc7 PE=1 SV=1 [Swiss-Prot]
  • POSSIBLY INVOLVED IN NUCLEAR PROTEIN LOCALISATION: O94522; [pompepVF.fasta]
  • POSSIBLE INVOLVEMENT IN NUCLEAR PROTEIN LOCALISATION: O94522; [pompepV13]
  • Possible involvement in nuclear protein localisation [pompep4896]
  • |||possibly involved in nuclear protein localization [pompepnew.fasta]
  • SPCC1281.05 protein [4896.FASTAC]
  • |||involved in protein targeting (predicted)|Schizosaccharomyces pombe|chr 3|||Manual [pombe041504.fasta]
  • possible involvement in nuclear protein localisation [Schizosaccharomyces pombe]gi|4160581|emb|CAA22826.1| SPCC1281.05 [Schizosaccharomyces pombe]gi|7492242|pir||T40924 nuclear localization protein - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||involved in protein targeting |Schizosaccharomyces pombe|chr 3|||Manual [pompep2242005.fasta]
  • (O94522) Possible involvement in nuclear protein localisation [pompep4896_normal_reversed]
  • |rsc7||RSC complex subunit Rsc7|Schizosaccharomyces pombe|chr 3|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPCC1281.05 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPCC1281.05 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Chromatin structure-remodeling complex subunit rsc7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rsc7 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 390 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    nuclear chromatin [ICLink to PubMed article]
    RSC complex [IDALink to PubMed article]
    Biological Process: chromatin remodeling [ISSLink to PubMed article]
    gene-specific transcription from RNA polymerase II promoter [ICLink to PubMed article]
    RNA elongation from RNA polymerase II promoter [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTAGSDAS TPTNHTVSSK KRRGRPPKGS YAAYGSSDDD DEEYSGRTRR RNRNTRPRVS  60
   61 APSSSSTVVP KDLYSHRATL EDDELNFGVV DPEGEKKVNE LGYLNGGREY RCRTFTCLGR 120
  121 GNRLYMLSTE PARAMGYRDS YLLFLKHRSL HKIIVDDSEK WDLIERNIIP HSYKGRAVGI 180
  181 VAARSIFREF GARIIVGGRR IVDDYWEGEF RARGFVEGEL ADPDDKLPPP GMPYNRNQYV 240
  241 AWHGASAVYH PQPSLEAQLP AAARKRKKEP PKDATWLFQH AKATAAYNND ITKYLVQKQD 300
  301 IGYFEPHTNL LHVPLNTQPT KTHWIQAKTG TECPAPKLDI LVALNSDVAP QVSIANIPPS 360
  361 VYASCPLHVQ EAIRKRQEQE IRSIRLNSMY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..66] MSA 1.023996 View MSA. No confident structure predictions are available.
    2 View Details [67..222] Pfam 77.657577 No description for PF08624.1 was found. No confident structure predictions are available.
    3 View Details [223..390] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle