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Protein Overview: SPBC365.14c

General Information:
Name(s) found: SPBC365.14c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • UDP-glucose 4-epimerase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 355 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: galactose catabolic process via UDP-galactose [ISSLink to PubMed article]
    Molecular Function: coenzyme binding [IEA]
    UDP-glucose 4-epimerase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGVHEGTVL VTGGAGYIGS HTCVVLLEKG YDVVIVDNLC NSRVEAVHRI EKLTGKKVIF  60
   61 HQVDLLDEPA LDKVFANQNI SAVIHFAGLK AVGESVQVPL SYYKNNISGT INLIECMKKY 120
  121 NVRDFVFSSS ATVYGDPTRP GGTIPIPESC PREGTSPYGR TKLFIENIIE DETKVNKSLN 180
  181 AALLRYFNPG GAHPSGELGE DPLGIPNNLL PYIAQVAVGR LDHLNVFGDD YPTSDGTPIR 240
  241 DYIHVCDLAE AHVAALDYLR QHFVSCRPWN LGSGTGSTVF QVLNAFSKAV GRDLPYKVTP 300
  301 RRAGDVVNLT ANPTRANEEL KWKTSRSIYE ICVDTWRWQQ KYPYGFDLTH TKTYK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..355] PSI-BLAST 72.39794 Crystal structure of the gal10 fusion protein galactose mutarotase/UDP-galactose 4-epimerase from Saccharomyces cerevisiae complexed with NAD, UDP-glucose, and galactose

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • UDP-glucose 4-epimerase activity
    		•  2.13934644118967 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.03956654822048 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.868888700854563 bayes_pls_golite062009
  • binding
    		•  0.835119783772935 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.82673050487418 bayes_pls_golite062009
  • DNA binding
    		•  0.790382977752475 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.613310508772122 bayes_pls_golite062009
  • transcription factor activity
    		•  0.11102650759187 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle