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Protein Overview: SPCC825.01

General Information:
Name(s) found: SPCC825.01 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • ribosome biogenesis ATPase, Arb family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 822 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [NASLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: ribosomal small subunit export from nucleus [NAS]
    ribosome biogenesis [NAS]
    Molecular Function: ATPase activity [NASLink to PubMed article]
    ATP binding [NASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGKRSTQR DADLELESLQ SEIESESPQP VTKSKAKKNK KKLNKASAFN SDNDSNYDLK  60
   61 PEDDEVDEEV VPVKKKPSKK SKKAKANAFE AFADEQSVEE EEEEDSEKPV RKNKKSSKKA 120
  121 SPKNAFDALA DDMDDLSLDE EESESSEKSK KKKKKSKSKD DGSEALDDGD IESSEKDKKK 180
  181 KKKSKENDDA PKKDRKTRKK EEKARKLASM LESENKDNDA NAAPLNKTDA FKDGLPSGRL 240
  241 IFAYASGQKV APDGSNPADG ITVTGNLLSP PNSRDLQVEK LSVSAWGKLL IKDSELNLIN 300
  301 GRRYGLIAPN GSGKSTLLHA IACGLIPTPS SLDFYLLDRE YIPNELTCVE AVLDINEQER 360
  361 KHLEAMMEDL LDDPDKNAVE LDTIQTRLTD LETENSDHRV YKILRGLQFT DEMIAKRTNE 420
  421 LSGGWRMRIA LARILFIKPT LMMLDEPTNH LDLEAVAWLE EYLTHEMEGH TLLITCHTQD 480
  481 TLNEVCTDII HLYHQKLDYY SGNYDTFLKV RAERDVQLAK KARQQEKDMA KLQNKLNMTG 540
  541 SEQQKKAKAK VKAMNKKLEK DKQSGKVLDE EIIQEKQLVI RFEDCGGGIP SPAIKFQDVS 600
  601 FNYPGGPTIF SKLNFGLDLK SRVALVGPNG AGKTTLIKLI LEKVQPSTGS VVRHHGLRLA 660
  661 LFNQHMGDQL DMRLSAVEWL RTKFGNKPEG EMRRIVGRYG LTGKSQVIPM GQLSDGQRRR 720
  721 VLFAFLGMTQ PHILLLDEPT NALDIDTIDA LADALNNFDG GVVFITHDFR LIDQVAEEIW 780
  781 IVQNGTVKEF DGEIRDYKMM LKQQIAKERE EERRIELEKQ KK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..182] PSI-BLAST 8.39794 CRYSTAL STRUCTURE OF ATP-FREE RAD50 ABC-ATPASE
    2 View Details [183..729] PSI-BLAST 41.09691 No description for 2iw3A was found.
    3 View Details [730..822] PSI-BLAST 59.221849 RNase-L Inhibitor


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle