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Protein Overview: SPCC1450.03

General Information:
Name(s) found: SPCC1450.03 [Sanger Pombe]
Description(s) found:
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  • pir||T40985 hypothetical protein SPCC1450.03 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74626309|sp|Q9Y7N1.1|YCK3_SCHPO RecName: Full=Uncharacterized protein C1450.03 [NCBI NR]
  • gi|4581513|emb|CAB40170.1| ribonucleoprotein (RNP) complex (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19075802|ref|NP_588302.1| ribonucleoprotein (RNP) complex (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • ribonucleoprotein (RNP) complex [Sanger Pombe]
  • Uncharacterized protein C1450.03 OS=Schizosaccharomyces pombe GN=SPCC1450.03 PE=1 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SEQUENCE ORPHAN: Q9Y7N1; [pompepVF.fasta]
  • Hypothetical protein [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • SPCC1450.03 protein [4896.FASTAC]
  • |||ribonucleoprotein (RNP) complex (predicted)|Schizosaccharomyces pombe|chr 3|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|4581513|emb|CAB40170.1| SPCC1450.03 [Schizosaccharomyces pombe]gi|7491809|pir||T40985 hypothetical protein SPCC1450.03 - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||ribonucleoprotein |Schizosaccharomyces pombe|chr 3|||Manual [pompep2242005.fasta]
  • (Q9Y7N1) Hypothetical protein [pompep4896_normal_reversed]
  • SPCC1450.03 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPCC1450.03 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Uncharacterized protein C1450.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1450.03 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 240 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    small-subunit processome [IEA]
    spindle pole body [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: rRNA processing [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATTGNIIK FEENADSKDL LEQCLNCSDV GVVSNTVRNM DGTIAADLAR TLIPAMLINM  60
   61 QPSLAIWLHW IIVTHGGYLT TVMDLQDSLV QLHEKLVQSA HLMTKIFSLS GKLNMVLSQE 120
  121 EMRQRRLDFS SEDGEEEEEN DYIDEDVDEA GYDIEVVDEA ENDDMDNDLE ANADAFDESN 180
  181 LEASLSPNAE LSPRKSHIDH DFVIPEDEML SEEEEQEVEK QILPKFVVPE SPRKTSRKSR 240
  241

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] MSA 3.058995 View MSA. Confident ab initio structure predictions are available.
    2 View Details [129..240] MSA 18.058997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.44

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle