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Protein Overview: SPAC1006.02

General Information:
Name(s) found: SPAC1006.02 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • WD repeat protein, human GNB1L family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 368 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    ASTRA complex [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: chromatin remodeling [IPILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVPTPFYVL RGHSSSVTSV LFDANEYLYS GDEAGFVICW CLTSMRPKCA WRAHTKTILG  60
   61 MQIVKGGALC THGRDCRLVT WKIDFNCMTD NFMSLSKLAE LQNYGPEASS ETEKSSAFIS 120
  121 IHSNIVVNSL TFCPFSYSPQ SKIVVLCNTL NFEELDVYDD ESLYHPQTHK EDCGKRLQTR 180
  181 IQPEESVGKT GSVMSTSVTV TDEKYVLLAA GYESGHVVQY ICSLENVKTV TLDFKAVWKM 240
  241 VYAYKSHSQP VLSVEYAGSK LFSTGADDCI CLHPTPSSIA DDLGSLPHPI FRKTKHCGQQ 300
  301 NIRIRSDNKI LATAGWDGRG RVYSCQTLAP LAVLKYHSDG INSLAFHPGS NVIALASKDT 360
  361 RISLWKLY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..368] PSI-BLAST 43.154902 No description for 2ovpB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle