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Protein Overview: fbh1

General Information:
Name(s) found: fbh1 / SPBC336.01 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • DNA helicase I [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 878 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][NASLink to PubMed article]
    ubiquitin ligase complex [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: DNA recombination [IGILink to PubMed article]
    double-strand break repair via homologous recombination [IGILink to PubMed articleLink to PubMed article]
    chromosome segregation [IMPLink to PubMed article]
    replication fork processing [IMPLink to PubMed article]
    regulation of DNA recombination [IGILink to PubMed article]
    Molecular Function: magnesium ion binding [IEA]
    DNA binding [IEA]
    ATP binding [IEA]
    protein binding [IPILink to PubMed article]
    manganese ion binding [IEA]
    protein binding, bridging [ISSLink to PubMed article]
    single-stranded DNA-dependent ATP-dependent DNA helicase activity [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAQHLHSCK FYRLPLEIIP LICRFLSVQD IQSFIRVFPS FQTILDSSND LFWKKKNYEL  60
   61 RIRRNRLLRG SYAAGVSSSA MNGFVNGTQI SSTPAEREYY SKSDEIKNIC GLPPGPMKVE 120
  121 QIGHAIDHLV SETHTVDHLG SSIKASFFHI DDVPLEWISS ICMQVQSFFS PAAREAISSL 180
  181 KSRTTTSNLL LSLFVGILFE DDLWYFFNTL YMLSSTSAIE FAYFLDSIFT VVRTDYEHYR 240
  241 DPLSQTLITS CTRIHNIVAV IESPYDEPNT KGLTSEQKMI VECQLNPGEV LKVKAFAGTG 300
  301 KTKALLEFAK SRPKDKILYV AFNKAAKEDA ELRFPFNVKC STMHGLAYGA ILAQADLPQA 360
  361 KLERQLSNST IASLLSLQVA FPKANRKNNP GTPSASLVAS HIMFTLNRFM HSTDWQLGFR 420
  421 HISKRSLEVT KLSKEKLLAY TKKLWSLIVN FEYTHAPLIP DAYMKLLHLY EFPNIFSKYD 480
  481 YILFDEAQDF TPCMVDLIYR QKHARIVIVG DAHQCIYGFR GANACAFNEN LYPSTKQLCL 540
  541 TKSFRFGNSV AKYANFLLSL KGENVKLKGV QNDHAYWSSA SNPNNVSGAF RFFPHTIIFR 600
  601 TNKELILQSI RLSVSLPKEI PIAILGSMRK KAFQLLRSGS ELAHGQRPSH PKLKDFSSWG 660
  661 EFEVHVKNSA EEDAELALVY DMADELFSES FLSRLDNCEK RLMDSKDDGD NGIILATAHQ 720
  721 SKGLEWDNVQ LGNDFRPKFD SVSFSRIGSS RYLQEEINIL YVALTRAKKR LILNDTITKL 780
  781 YALECGLVRF AGGILTEDQL QPGKVALFVD WQIDKFSFFY ETPAEGYNLL VEANEKSVWD 840
  841 IFFGVLSGAW QNYIANTSER LKRSMLFIEN QLFAVHDQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] deduced N/A No confident structure predictions are available.
    2 View Details [152..799] PSI-BLAST 36.522879 No description for 2gjkA was found.
    3 View Details [800..878] PSI-BLAST 96.522879 STRUCTURE OF DNA HELICASE


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.53

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle