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Protein Overview: yth1

General Information:
Name(s) found: yth1 / SPAC227.08c [Sanger Pombe]
Description(s) found:
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  • gi|74625941|sp|Q9UTD1.1|YTH1_SCHPO RecName: Full=mRNA 3'-end-processing protein yth1 [NCBI NR]
  • gi|6455911|emb|CAB61457.1| zinc finger protein Yth1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113874|ref|NP_592962.1| zinc finger protein Yth1 [Schizosaccharomyces pombe] [NCBI NR]
  • pir||T50164 probable cleavage and polyadenylation specificity factor [imported] - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • zinc finger protein Yth1 [Sanger Pombe]
  • mRNA 3'-end-processing protein yth1 OS=Schizosaccharomyces pombe GN=yth1 PE=2 SV=1 [Swiss-Prot]
  • ZINC FINGER PROTEIN; ZF-CCCH TYPE; PUTATIVE CLEAVAGE AND POLYADENYLATION FACTOR; SIMILAR TO S. CEREVISIAE YTH1: Q9UTD1; [pompepVF.fasta]
  • PUTATIVE CLEAVAGE AND POLYADENYLATION FACTOR; SIMILAR TO S. CEREVISIAE YTH1: Q9UTD1; [pompepV13]
  • Putative cleavage and polyadenylation specificity factor [pompep4896]
  • |||zinc finger protein [pompepnew.fasta]
  • SPAC227.08c protein [4896.FASTAC]
  • |yth1||zinc finger protein|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • putative cleavage and polyadenylation factor; similar to S. cerevisiae YTH1 [Schizosaccharomyces pombe]gi|6455911|emb|CAB61457.1| SPAC227.08c [Schizosaccharomyces pombe]gi|11359232|pir||T50164 probable cleavage and polyadenylation specificity factor [im [nrdb_11152004_Chlamydomonas]
  • (Q9UTD1) Putative cleavage and polyadenylation specificity factor [pompep4896_normal_reversed]
  • |yth1||zinc finger protein Yth1|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC227.08c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • mRNA 3'-end-processing protein yth1 [nr-271106-contam.fasta]
  • hypothetical protein SPAC227.08c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |yth1||mRNA cleavage and polyadenylation specificity factor complex Yth1|Schizosaccharomyces pombe|chr 1|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • mRNA 3'-end-processing protein yth1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yth1 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 170 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    mRNA cleavage and polyadenylation specificity factor complex [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: mRNA polyadenylation [ICLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]
    RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDYIKDKAI AADFSSVQFR FDNYLKQNFN FGRSALLNSG NGRDSGSKMG SVVCKHWLRG  60
   61 LCKKGEQCDF LHEYNLKKMP PCHFYAERGW CSNGEECLYL HLDPSKQVGV CAWYNMGFCP 120
  121 LGPICRGKHV RKPRPCPKYL AGFCPLGPNC PDAHPKHSEP PHPPQKRKDW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] PSI-BLAST 10.39794 No description for 2d9nA was found.
    2 View Details [105..170] FFAS03 2.4 Solution Structure of the Zinc-finger domain in KIAA1064 protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle