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Protein Overview: SPAPB1E7.04c

General Information:
Name(s) found: SPAPB1E7.04c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • chitinase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1236 amino acids

    Gene Ontology:
    Cellular Component: fungal-type cell wall [ISSLink to PubMed article]
    fungal-type vacuole [IDALink to PubMed article]
    cell surface [ICLink to PubMed article]
    Biological Process: ascospore wall chitin catabolic process [ICLink to PubMed article]
    cytokinetic cell separation [ISSLink to PubMed article]
    extracellular polysaccharide metabolic process [IC]
    Molecular Function: chitinase activity [ISSLink to PubMed article]
    cation binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLISSLLLL VYSARLALSL NLTNQTAVLG YWGSNLAGKM GDRDQKRLSS YCQNTTYDAI  60
   61 ILSSVIDFNV DGWPVYDFSN LCSDSDTFSG SELKKCPQIE TDIQVCQENG IKVLLSIGGY 120
  121 NGNFSLNNDD DGTNFAFQVW NIFGSGEDSY RPFGKAVVDG FDLEVNKGTN TAYSAFAKRM 180
  181 LEIYASDPRR KYYISAAPTC MVPDHTLTKA ISENSFDFLS IHTFNSSTGE GCSGSRNSTF 240
  241 DAWVEYAEDS AYNTNTSLFY GVVGHQNGSN GFISPKNLTR DLLNYKANST LFGGVTIWDT 300
  301 SLAAMSYDNS SETFVEAIHK ILDTKSKHSS SKSSHDSSQG LESTSSIALN PTSSISSTSS 360
  361 SSSTSSAIST ISQDHTKTVT SVSDEPTTIT ASGATSVTTT TKTDFDTVTT TIVSTSTLIS 420
  421 ASDSTSIIVS SYVSTVTQPA STRVQTTTVS SISTSVKQPT ASVASSSVSV PSSSSVQPQS 480
  481 STPISSSSSA SSPQSTLSTS SEVVSEVSST LLSGSSAIPS TSSSTPSSSI ISSPMTSVLS 540
  541 SSSSIPTSSS SDFSSSITTI SSGISSSSIP STFSSVSSIL SSSTSSPSST SLSISSSSTS 600
  601 STFSSASTSS PSSISSSISS SSTILSSPTP STSSLMISSS SIISGSSSIL SSSISTIPIS 660
  661 SSLSTYSSSV IPSSSTLVSS SSSLIVSSSP VASSSSSPIP SSSSLVSTYS ASLSNITHSS 720
  721 LSLTAMSSSS AIPTSVNSST LITASSSNTL LSSITSSSAI VSSTTVSNIS SNLPSATASS 780
  781 QSQLTNSSTL ATSLYLSSSS SRTISTSSTN EYNTSFHAPT VSSTTSSSST TSLAANKGVN 840
  841 SNSITSLNLE STSSVTSTAY TTDSVTSTTA LTSQGPSSSV VSSSLSSTTS LSTSIPVTSS 900
  901 VAPAVTSTGS ETSSVVGSGT DSATSSSWTA ETSSSAITSS VAASVTPTSS SSASSWSSSS 960
  961 EVDPSTAASA TGSSTSSIAT ASVSGSSTSS VATASATDSS TSSIAAASVT GSSTSSVATA1020
 1021 SVTDSSTSSV ATASATDSST SSIAVASVTG SSTSSVATAS ATDSSTSSVA TASITGSLSS1080
 1081 SIATASVTGS PTSSVTAVSS TSSVEGTASS TIAAAASAAT LSSDAASGSS TVTSSATASS1140
 1141 SSSAATTADS SVTTDTPSND FNANVDTAGL WYVSALSSYS VPAGFAWTTI DGFSVVMPSA1200
 1201 NAYKKRSLPI KATANPALNG AGTWKTIHTS ATTTAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..317] PSI-BLAST 51.0 CRYSTAL STRUCTURES OF HEVAMINE, A PLANT DEFENCE PROTEIN WITH CHITINASE AND LYSOZYME ACTIVITY, AND ITS COMPLEX WITH AN INHIBITOR
    2 View Details [318..390] deduced N/A No confident structure predictions are available.
    3 View Details [391..439] deduced N/A No confident structure predictions are available.
    4 View Details [440..574] deduced N/A No confident structure predictions are available.
    5 View Details [575..676] MSA 1.153992 View MSA. No confident structure predictions are available.
    6 View Details [677..869] MSA 1.156988 View MSA. No confident structure predictions are available.
    7 View Details [870..1090] deduced N/A No confident structure predictions are available.
    8 View Details [1091..1236] FFAS03 1.36 THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • chitinase activity
    		•  3.75203266278127 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  3.1190602686215 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  2.98773241907716 bayes_pls_golite062009
  • catalytic activity
    		•  2.22613067995402 bayes_pls_golite062009
  • hydrolase activity
    		•  1.97740088175981 bayes_pls_golite062009
  • glucosidase activity
    		•  0.58717079348538 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.16438321606077 bayes_pls_golite062009
  • amylase activity
    		•  0.0914002140078796 bayes_pls_golite062009
  • alpha-amylase activity
    		•  0.0521244165288097 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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