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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAPB1E7.04c
Protein type: Globular with Signal Peptide
Type Confidence: 0.22
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLISSLLLL VYSARLALSL NLTNQTAVLG YWGSNLAGKM GDRDQKRLSS YCQNTTYDAI  60
   61 ILSSVIDFNV DGWPVYDFSN LCSDSDTFSG SELKKCPQIE TDIQVCQENG IKVLLSIGGY 120
  121 NGNFSLNNDD DGTNFAFQVW NIFGSGEDSY RPFGKAVVDG FDLEVNKGTN TAYSAFAKRM 180
  181 LEIYASDPRR KYYISAAPTC MVPDHTLTKA ISENSFDFLS IHTFNSSTGE GCSGSRNSTF 240
  241 DAWVEYAEDS AYNTNTSLFY GVVGHQNGSN GFISPKNLTR DLLNYKANST LFGGVTIWDT 300
  301 SLAAMSYDNS SETFVEAIHK ILDTKSKHSS SKSSHDSSQG LESTSSIALN PTSSISSTSS 360
  361 SSSTSSAIST ISQDHTKTVT SVSDEPTTIT ASGATSVTTT TKTDFDTVTT TIVSTSTLIS 420
  421 ASDSTSIIVS SYVSTVTQPA STRVQTTTVS SISTSVKQPT ASVASSSVSV PSSSSVQPQS 480
  481 STPISSSSSA SSPQSTLSTS SEVVSEVSST LLSGSSAIPS TSSSTPSSSI ISSPMTSVLS 540
  541 SSSSIPTSSS SDFSSSITTI SSGISSSSIP STFSSVSSIL SSSTSSPSST SLSISSSSTS 600
  601 STFSSASTSS PSSISSSISS SSTILSSPTP STSSLMISSS SIISGSSSIL SSSISTIPIS 660
  661 SSLSTYSSSV IPSSSTLVSS SSSLIVSSSP VASSSSSPIP SSSSLVSTYS ASLSNITHSS 720
  721 LSLTAMSSSS AIPTSVNSST LITASSSNTL LSSITSSSAI VSSTTVSNIS SNLPSATASS 780
  781 QSQLTNSSTL ATSLYLSSSS SRTISTSSTN EYNTSFHAPT VSSTTSSSST TSLAANKGVN 840
  841 SNSITSLNLE STSSVTSTAY TTDSVTSTTA LTSQGPSSSV VSSSLSSTTS LSTSIPVTSS 900
  901 VAPAVTSTGS ETSSVVGSGT DSATSSSWTA ETSSSAITSS VAASVTPTSS SSASSWSSSS 960
  961 EVDPSTAASA TGSSTSSIAT ASVSGSSTSS VATASATDSS TSSIAAASVT GSSTSSVATA1020
 1021 SVTDSSTSSV ATASATDSST SSIAVASVTG SSTSSVATAS ATDSSTSSVA TASITGSLSS1080
 1081 SIATASVTGS PTSSVTAVSS TSSVEGTASS TIAAAASAAT LSSDAASGSS TVTSSATASS1140
 1141 SSSAATTADS SVTTDTPSND FNANVDTAGL WYVSALSSYS VPAGFAWTTI DGFSVVMPSA1200
 1201 NAYKKRSLPI KATANPALNG AGTWKTIHTS ATTTAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle