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Protein Overview: SPBC30B4.03c

General Information:
Name(s) found: SPBC30B4.03c [Sanger Pombe]
Description(s) found:
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  • pir||T40169 hypothetical protein SPBC30B4.03c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74626850|sp|O74364.1|YND3_SCHPO RecName: Full=Uncharacterized protein C30B4.03c [NCBI NR]
  • gi|3417429|emb|CAA20316.1| adhesion defective protein [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112320|ref|NP_595528.1| conserved protein (fungal and plant) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • conserved protein (fungal and plant) [Sanger Pombe]
  • Uncharacterized protein C30B4.03c OS=Schizosaccharomyces pombe GN=SPBC30B4.03c PE=2 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; CONTAINS PFAM-B_10162 DOMAIN; NO APPARENT S. CEREVISIAE ORTHOLOG: O74364; [pompepVF.fasta]
  • HYPOTHETICAL PROTEIN; CONTAINS PFAM-B_10162 DOMAIN: O74364; [pompepV13]
  • Possible LIM domain binding protein, low similarity [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • Conserved protein (S. pombe and plants); no apparent S. cerevisiae ortholog [4896.FASTAC]
  • |||hypothetical protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • possible LIM domain binding protein; low similarity [Schizosaccharomyces pombe]gi|7491582|pir||T40169 hypothetical protein SPBC30B4.03c - fission yeast (Schizosaccharomyces pombe)gi|3417429|emb|CAA20316.1| conserved protein (S. pombe and plants); no ap [nrdb_11152004_Chlamydomonas]
  • |||conserved protein |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O74364) Possible LIM domain binding protein, low similarity [pompep4896_normal_reversed]
  • |adn1||adhesion defective protein|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBC30B4.03c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC30B4.03c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |adn1||adhesion defective protein, predicted transcriptional regulator |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 391 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: transcription [ISS]
    positive regulation of cell-substrate adhesion [IMPLink to PubMed article]
    Molecular Function: transcription cofactor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVANYASMMY HNGSNILGYG VLRLLQYNEQ LMSGWESTMK DDIGYWRRFV HDFYTEKGTF  60
   61 RYNIDYKDSP NQEPKLFELS YAALPRFLYL SYCGKLKKMS FLLGNTKEFA IPNNGYFVES 120
  121 SRASILYQYQ GGVQVIVSGH LRAHFFRAPL LKLDSLEFSA VGHSEYLLRE LMTNASLALS 180
  181 QSRPPQNQIQ HDGVKSEDPS SESVNINSSS SLLPDSPVNE YGLEPHIMRF MEITETISGM 240
  241 RDLIAFTLAQ RSGPTSALHK FATALQQQHQ MQKSTSSNIP YANPAPSGFN GSPRNGDVAS 300
  301 LASNYRYAKQ PPTMPANAIS QANRLLDQNN IPNMDPSILP QSMPIASVPP YSLQGIKRQG 360
  361 THSPMVEGEN PNNNPNFYSS DMLNAQKRTK V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] MSA 2.043981 View MSA. No confident structure predictions are available.
    2 View Details [147..391] MSA 3.044966 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle