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Protein Overview: coq5

General Information:
Name(s) found: coq5 / SPCC4G3.04c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • C-methytransferase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 305 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: aerobic respiration [ISSLink to PubMed article]
    ubiquinone biosynthetic process [ISSLink to PubMed article]
    Molecular Function: 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRLRAPVAK FLADGLKGIR STALAGSRLS NCRYTSTSSK DTDTSSHMTH FGFKDVPEDE  60
   61 KEHLVKNVFS SVAKKYDEMN DAMSLGIHRL WKNIFVSRLN PGNSTVPMKI LDVAGGTGDI 120
  121 AFRILNHATN HNGDRNTRVI VADINPDMLS VGLRRSKKTP YYDSGRVEFI EQNAEILDKI 180
  181 PDNSIDMYTI AFGIRNCTHI PKVLEQAYRV LKPGGVFSCL EFSKVYPAPL AELYRQYSFK 240
  241 ILPLLGTIIA GDSQSYEYLV ESIERFPDAK TFAKMIEDAG FTLAGETGYE TLSFGIAAIH 300
  301 TGIKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..305] PSI-BLAST 10.69897 Crystal structure of aclacinomycin-10-hydroxylase (RdmB) in complex with S-adensyl-L-methionine (SAM)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • transferase activity
    		•  1.07321114919891 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.964067575431689 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.612108481676679 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.606225212585352 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.14147363365106 bayes_pls_golite062009
  • binding
    		•  0.109975487409217 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle