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Protein Overview: SPAC328.02

General Information:
Name(s) found: SPAC328.02 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • Ariadne homolog [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 504 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: proteasomal ubiquitin-dependent protein catabolic process [TASLink to PubMed article]
    protein ubiquitination [ISSLink to PubMed article]
    Molecular Function: ubiquitin-protein ligase activity [ISSLink to PubMed article]
    zinc ion binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLLDDEFY EEEFENDLLD ASEFEDEFDE DAEIDDDGFT VERKRRRAHS VSYRVVSVRD  60
   61 LRASLNEKIN QLTSIIDLTR EQVLGLYRYF KWNRERLLER YIDAPEESLQ KAGVGLSGSK 120
  121 QREVVHHEGT CEICYDEGCL PFFSAECDHE FCLACYRQYL DSRISEGESV IQCPEESCTQ 180
  181 IVSIQSITKV LDEKSLDRYH RLLDRSFVDD NDHLRWCPAP DCEFAIECHV TQASLSSVVP 240
  241 TVTCNCGKQF CFGCGHDNHQ PTICPLVKIW LQKCQDDSET ANWIHANTKE CPKCSTTIEK 300
  301 NGGCNHMTCK KCKYEFCWVC LGPWTEHGNN WYTCNRYEEK SSTSARDSQS KSRASLERYL 360
  361 HYYNRFANHE QSAKLDHELY EHTHKRMTQM QVDSNLSWVE VQFLKNAVDI LFQCRQTLKW 420
  421 TYAFAYYLAR NNQTEIFEDN QRDLELAVEN LSELCERPCQ DCSLSVFKQR VLDKTVYVRS 480
  481 RRDVLLDDTA RGLAEGRWEY VVDV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] deduced N/A No confident structure predictions are available.
    2 View Details [104..190] PSI-BLAST 4.045757 No description for 2cklB was found.
    3 View Details [191..274] FFAS03 3.26 Solution Structure of the IBR domain of the RING finger protein 31 protein
    4 View Details [275..344] PSI-BLAST 9.39794 Solution Structure of the C-terminal RING from a RING-IBR-RING (TRIAD) motif
    5 View Details [345..504] MSA 8.193996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle