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Protein Overview: SPBC543.02c

General Information:
Name(s) found: SPBC543.02c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • DNAJ/TPR domain protein DNAJC7 family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 476 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    protein complex [RCALink to PubMed article]
    Biological Process: protein folding [IEA]
    Molecular Function: unfolded protein binding [IEA]
    Hsp70 protein binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEVETTHMN AGTESQQEPA ELAEKQKAIG NAFYKEKKYA EAIKAYTEAI DLGSDSALAI  60
   61 YYSNRAATYM QIGEFELALC DAKQSDRIKP DVPKTQSRIR QAYEGLSILN EAEVYLKNKQ 120
  121 AGLALNALDR LQRRIDSTTQ PPMSWMYLKA QVYIFQNDMD RAQKIAHDVL RLNPKNVEAL 180
  181 VLRGKVMYYS GENAKAITHF QEALKLDPDC TTAKTLFKQV RKLENTKNQG NDLFRQGNYQ 240
  241 DAYEKYSEAL QIDPDNKETV AKLYMNRATV LLRLKRPEEA LSDSDNALAI DSSYLKGLKV 300
  301 RAKAHEALEK WEEAVRDVQS AIELDASDAN LRQELRRLQL ELKKSKRKDH YKILGVSKEA 360
  361 TDIEIKKAYR KLALVYHPDK NAGNLEAEAR FKEVGEAYTI LSDPESRRRF DSGVDLEPGM 420
  421 EGGAGMDPFD ILRAYQAGGS FPGGGFPGGG FPGGSYNSQG FGMGGGFPGF TSFQFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..476] PSI-BLAST 35.0 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.48701537593139 bayes_pls_golite062009
  • heat shock protein binding
    		•  1.35268080101836 bayes_pls_golite062009
  • unfolded protein binding
    		•  1.03065657981002 bayes_pls_golite062009
  • protein binding
    		•  0.931467806305272 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle