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Protein Overview: SPBC543.04

General Information:
Name(s) found: SPBC543.04 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • UPF0171 family protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 585 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRLTPRLVA IFLVEKTTSG ANFVFHWPLQ PQVRLQATHH NNDSAESAIG MLDLDDSDDD  60
   61 ENNRFTEVAD DTHVLGYEKG FLANMLSPRI ELCNQKFEIW VDGLTFLGCP VHIGPNGEWA 120
  121 KRRKPRTTVE SNASSSHLVS KPESSHPSTG SFEVKSSSSK SRSSMSLFHV VFVLNVPTAT 180
  181 VYRPTVNTMY DHIVVKLVTG LKYEQAKRNY VENECIHILK LTEKYSSQNV PFDVYAAQIP 240
  241 HHSNLASVLA TTYEALINMH TAYLEINQSI NLSLLWPMSV STNTLENYEL QVRPSTILAS 300
  301 QTIFSEEHPS SIEPFVAPYW TLLLLKDTDT IMKRVPLLQN SLLSSFIAIV KPNLTFTDIA 360
  361 NRLGISVSEC FILAKHLIHW RKAIAIPPLL IRNTYVTSPT ANLFNLEEES KLFKKEFPSL 420
  421 PSLSTFLAIL SFKPRPFASI IPSKDHELVY LEMLAWLCRR NWVYEQNIYM YILVPEEIKK 480
  481 KAIALIESDE SSKNDMQLRK QLEQDNGKES IIIDPHSASL LEQKWIQIIA YERGPEMAPL 540
  541 FTSIVKYLNG RFALQTIWVA EGLPRKLMRN ILNEYNDYIL RWHSW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..54] MSA 1.019994 View MSA. No confident structure predictions are available.
    2 View Details [55..230] MSA 2.037955 View MSA. No confident structure predictions are available.
    3 View Details [231..390] MSA 1.036994 View MSA. No confident structure predictions are available.
    4 View Details [391..464] deduced N/A No confident structure predictions are available.
    5 View Details [465..585] MSA 1.033989 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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