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Protein Overview: SPAC2E1P5.05

General Information:
Name(s) found: SPAC2E1P5.05 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • U3 snoRNP-associated protein Rrp9 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 524 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    protein complex [RCALink to PubMed article]
    nucleolus [IDALink to PubMed article]
    small nucleolar ribonucleoprotein complex [ISSLink to PubMed article]
    Biological Process: maturation of SSU-rRNA [ISSLink to PubMed article]
    Molecular Function: snoRNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDPFFTRPE HRKRKARSAT SKREKENQKL ERNGPANEDL ASISSESEFN GFEDEIDEEN  60
   61 EDTYETAAEK RLRLAREYLD EVKNELVEDG GFDAKEVDRE LLASRLKEDV LEKKGQMYLD 120
  121 YTSKINPDVK IETAQLRGRH MRPLVGVVAY ENFVYSADKS GLIQKWEALQ EKDTENREND 180
  181 DHEIGKAIKL HFRPIKFSRS RRGENDHVKE ITCLAISNDG RWIVTGGLDH RIVIRDSVTL 240
  241 EPQHCWKHHR DAVMGLAMRR GTNEMFSCSA DRSIKVWSLD QMSYIETLFG HQDVIFGVDA 300
  301 LARERCVSVG GRDRTSRLWK IVEESQLVFR SGGTSMKATA GYMEGSVDCV AMIDEDHFVT 360
  361 GSDNGVIALW SVQRKKPLFT YPLAHGLDPI LAPGRHSAET SPDPVTIPPQ PRWITSLAAI 420
  421 PYSNLFASGS WDGNIRLWKI AEGLRSFEPL TIATPLSVYG CINSLSLSLQ GKGKQSEVRV 480
  481 FAACGRETRV GRWKTLRGIP NSGFVFNIPL TVIPSVTDGD EIDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..440] PSI-BLAST 24.69897 Crystal Structure Of The C-Terminal WD40 Domain Of Sif2
    2 View Details [441..524] PSI-BLAST 52.69897 No description for 2ovpB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle