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Protein Overview: SPAC607.06c

General Information:
Name(s) found: SPAC607.06c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • metallopeptidase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 612 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cell division site [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: zinc ion binding [IEA]
    metallopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQIILDNIS QNETVYNRFV IIHGRVGPRA SYCPQTINVK HHENSFPEQT WVVTDLYFKA  60
   61 IIHVVPGDNT ILFTTDDGGK LELQVYYQLL VDNPFYCIAF IVGKDSDLSF DAPHGAKNDI 120
  121 DEGIRKLRCA AYLWQAFTAE CMYRNGYGRR SFRIEESVQP DTMSCLSPWG TERLTATINI 180
  181 LRSDKTAEEI RSVPPDQLFH IAGDAVDKLH LPEPWHYMCM FLDTRYDPST QKIRGHVALG 240
  241 GGTDMHKLGV FGSHSLHSFP SALEYVVPVF SDARRIPSYL ANDANESSTI WECANIGIGA 300
  301 MLHELGHTLG CPHQPDGIML RSYPIFNRSF TTREFECVRT GSKGLAPVLA KDECSWHHLD 360
  361 MLRFFYHPCF KLPSDPTYPS DIETNYFVKG ETITFVNSTG IFLIEIEYNG QTKGWKEFNP 420
  421 PVGEASLTDA EIRSLSNASS NQDYRVRVLS RNFKCIDLNN VPEIIKNAKV ESSFGTVYRS 480
  481 ERYGLRGCNG KELSNILIAP EKFKPTKIRV HCGLALDGIE VFFGDESVLL GNRGGSPHDF 540
  541 EIQGSQIVGF QIRCGAWVDG ISIVLENGKT SPFYGNANGG GLKSYLVPKG FQLVGFYGTL 600
  601 GPFMDSIGFF IK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] deduced N/A No confident structure predictions are available.
    2 View Details [119..320] FFAS03 1.02 Macrophage elastase (MMP-12)
    3 View Details [321..389] deduced N/A No confident structure predictions are available.
    4 View Details [390..612] PSI-BLAST 34.154902 Crystal structure of the Parkia platycephala seed lectin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.43509040366727 bayes_pls_golite062009
  • hydrolase activity
    		•  1.15944157140755 bayes_pls_golite062009
  • catalytic activity
    		•  0.301168112279752 bayes_pls_golite062009
  • protein binding
    		•  0.273409914175328 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle