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Protein Overview: SPAPB1A10.07c

General Information:
Name(s) found: SPAPB1A10.07c [Sanger Pombe]
Description(s) found:
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  • gi|30913509|sp|Q9HDY3.1|YK17_SCHPO RecName: Full=Membrane protein PB1A10.07c [NCBI NR]
  • gi|19114433|ref|NP_593521.1| sphingolipid biosynthesis protein [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|12188971|emb|CAC21480.1| sphingolipid biosynthesis protein [Schizosaccharomyces pombe] [NCBI NR]
  • sphingolipid biosynthesis protein [Sanger Pombe]
  • Membrane protein PB1A10.07c OS=Schizosaccharomyces pombe GN=SPAPB1A10.07c PE=2 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE YDR105C; CONTAINS 10 PREDICTED TRANSMEMBRANE HELICES; PREDICTED N-TERMINAL SIGNAL SEQUENCE: Q9HDY3; [pompepVF.fasta]
  • HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE YDR105C; CONTAINS 10M PREDICTED TRANSMEMBRANE HELICES; PREDICTED N-TERMINAL SIGNAL SEQUENCE: Q9HDY3; [pompepV13]
  • Membrane protein PB1A10.07c [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • |||conserved eukaryotic protein|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • hypothetical protein; similar to S. cerevisiae YDR105C [Schizosaccharomyces pombe]gi|12188971|emb|CAC21480.1| SPAPB1A10.07c [Schizosaccharomyces pombe]gi|30913509|sp|Q9HDY3|YK17_SCHPO Membrane protein PB1A10.07c [nrdb_11152004_Chlamydomonas]
  • (Q9HDY3) Membrane protein PB1A10.07c [pompep4896_normal_reversed]
  • |||sphingolipid biosynthesis protein|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPAPB1A10.07c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAPB1A10.07c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |||sphingolipid biosynthesis protein |Schizosaccharomyces pombe|chr 1|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Membrane protein PB1A10.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1A10.07c PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 441 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    plasma membrane [ISSLink to PubMed article]
    Biological Process: phosphatidylserine metabolic process [ISSLink to PubMed article]
    sphingolipid biosynthetic process [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAVLSIPLA LASSLSGVVG IASSFLVTSV LSLTNSIQSN VGAVISYAVL YFVNSLLSWC  60
   61 MLSSWFNSKL SKLSAGYLQF DCQNDGKCYS VIAVHRLSFT LVMFHLFLAF ILSLCNTRSR 120
  121 VAIKIQNGLW PFKIVLWFVL GIFSFFIPTK FLSFWGNIIS VMGSALFIVY GLMLLVDFAH 180
  181 TWAERCVDRV LTSDSSSSKF YLIGSTVGMY VVGLVLTILT YVFFCASSCS FNQAINTINL 240
  241 LLCIAVSCLS VHPTIQEYNP RSGLAQSSMV MCYTCYLILS ALANRPDEGQ CNPWGNSASG 300
  301 TREFSKVIGA AFTFFTILYS AVRAASSRES DDSYSYLYAD SHDMGVSTPL EDGSSEEDKH 360
  361 QSDYNFIWFH IVFVLAAFYT ASLLTNWNTT SVYENQKNDV FVRIGFSYAA VWVKIITSWV 420
  421 CHGLYVWSCL APVFFPYRFM I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..193] MSA 3.064952 View MSA. No confident structure predictions are available.
    2 View Details [194..256] MSA 2.067992 View MSA. No confident structure predictions are available.
    3 View Details [257..388] MSA 2.066985 View MSA. No confident structure predictions are available.
    4 View Details [389..441] MSA 4.067995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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