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Protein Overview: SPBC365.01

General Information:
Name(s) found: SPBC365.01 [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • sec14 cytosolic factor family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 355 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cell division site [IDALink to PubMed article]
    cell tip [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: cellular cell wall organization [ISSLink to PubMed article]
    phospholipid transport [ISSLink to PubMed article]
    Molecular Function: phosphatidylinositol transporter activity [ISSLink to PubMed article]
    phosphatidylcholine transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADIPADRKK IVQEGWSRLF SDIEQPSYIQ KFPSQESLYV SFFEQCAFDD FDLTLLRFLK  60
   61 ARKFVVTDSS DMLANAIVWR QQANLRSIMV RGENGLNQNF VKASMYFIWG QDKKGRAIVF 120
  121 LNLHNFIPPK NTKDMEELKA LILYAMENAR LFLDSEQNAA KGVLGLVDLT YFSRKNIDLD 180
  181 FARVFAETFQ NYYPEILGQA LIVGSGFRMA LFEGVWSIGK YFLDPEVRSK VTFCKPAQVS 240
  241 GYVDSKYIPL SMHGQFDETK LYERAPPETA GIGKPENYEE LDKEYVDAAK EFIRLTREWI 300
  301 YAAGKPQEAE IEEKRKAFKY ECKKLWRKGV ALRPPNIYQR LGLIDANGHV DWSKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..355] PSI-BLAST 51.39794 The Crystal Structure of Human Supernatant Protein Factor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phospholipid transporter activity
    		•  4.82372291869245 bayes_pls_golite062009
  • lipid transporter activity
    		•  3.44932625048477 bayes_pls_golite062009
  • phosphatidylinositol transporter activity
    		•  3.08477039249457 bayes_pls_golite062009
  • binding
    		•  2.35923633198634 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.658164745879483 bayes_pls_golite062009
  • protein binding
    		•  0.592567938703741 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle