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Protein Overview: SPAC17G6.07c

General Information:
Name(s) found: SPAC17G6.07c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • SNARE Slt1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 222 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [ISSLink to PubMed article]
    integral to membrane [IEA]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: retrograde vesicle-mediated transport, Golgi to ER [ISSLink to PubMed article]
    intracellular protein transport [RCALink to PubMed article]
    Molecular Function: SNAP receptor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKDLISRLE RQFKLKRDEF QDPLELLKFE KNLDYARKLL WEEGKCQLDK VAEPQGLSKR  60
   61 IMDLQGRIYD LNVTMEKKLK IEEKKIKSKQ EKEIAHALQS IQERELRERQ QMSNVEASNA 120
  121 QLLTNQRSMQ TEISESLLHL ASVLKENALS FTNALVTDNQ VVERTGSLLD KNAHSLRHAN 180
  181 HGVQSYSKSK RLSFWLQLGM IIAVVVSFIV MIFILQFTKN QN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..222] FFAS03 1.51 Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle