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Protein Overview: snz1

General Information:
Name(s) found: snz1 / SPAC29B12.04 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • pyridoxine biosynthesis protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 296 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Biological Process: pyridoxine biosynthetic process [IGILink to PubMed article][IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAEIKGSTQ VKAGLAQMLK GGVIMDVVNA EQARIAEAAG ACAVMALERV PADIRAQGGV  60
   61 ARMSDPSMIK EIQAAVSIPV MAKVRIGHFV EAQILESIGV DYIDESEVLT PADDINHIEK 120
  121 SKFTVPFVCG SRNLGEALRR ISEGAAMIRT KGEAGTGDVV EAVRHTRQMQ GELRRVKSMS 180
  181 PDELYTYAKE IAAPIDLVKE CAQLGRLPVV NFAAGGVATP ADAALMMQLG CDGVFVGSGI 240
  241 FLSGDPAKRA RAIVRAVTHY NDPKILAEVS ENLGAAMVGR SVSSLEEKEK LATRGW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..296] PSI-BLAST 114.0 Structure of the synthase subunit of PLP synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.44231061702877 bayes_pls_golite062009
  • ribulose-phosphate 3-epimerase activity
    		•  1.56591581078504 bayes_pls_golite062009
  • binding
    		•  0.283052085721618 bayes_pls_golite062009
  • racemase and epimerase activity, acting on carbohydrates and derivatives
    		•  0.21095259308705 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle