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Protein Overview: SPAC20G4.05c

General Information:
Name(s) found: SPAC20G4.05c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • UPF0061 family protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 568 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    mitochondrion [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKLKDLPV SSTFTSNLPP DPLVPTVQAM KKADDRILHV PRFVEGGGLF TYLTPSLKAN  60
   61 SQLLAYSPSS VKSLGLEESE TQTEAFQQLV VGSNVDVNKC CPWAQCYGGY QFGDWAGQLG 120
  121 DGRVVSLCEL TNPETGKRFE IQVKGAGRTP YSRFADGKAV LRSSIREYLC CEALYALGIP 180
  181 TTQALAISNL EGVVAQRETV EPCAVVCRMA PSWIRIGTFD LQGINNQIES LRKLADYCLN 240
  241 FVLKDGFHGG DTGNRYEKLL RDVAYRNAKT VAKWQAYGFM NGVLNTDNTS ILGLSIDYGP 300
  301 FGFLDVYNPS FTPNHDDVFL RYSYRNQPDI IIWNLSKLAS ALVELIGACD KVDDLQYMEQ 360
  361 LHNSTDLLKK AFAYTSEVFE KIVEEYKNIV QNDFYDLMFK RVGLPSDSSN KILITDLLQI 420
  421 LEDYELDMPN CFSFLSRNSP SSMENEEYAA KLMQACICLN PNNERVRNES VKAFTNWVGR 480
  481 YSEATKTQED SSRLASMKKV NPHFTLRNWV LEEVIKEAYI GKFELFKKVC KMAACPFEDT 540
  541 WGFSKEEEDY LCYNTTPSKS QIQCSCSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..182] MSA 1.055963 View MSA. No confident structure predictions are available.
    2 View Details [183..308] deduced N/A No confident structure predictions are available.
    3 View Details [309..486] deduced N/A No confident structure predictions are available.
    4 View Details [487..568] MSA 1.056989 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle