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Protein Overview: SPAC6B12.05c

General Information:
Name(s) found: SPAC6B12.05c [Sanger Pombe]
Description(s) found:
Found 15 descriptions.
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  • chromatin remodeling complex subunit [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 295 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    nuclear chromatin [NAS]
    chromatin remodeling complex [NASLink to PubMed article]
    Biological Process: chromatin remodeling [NASLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRRSTRRA LVETPSDLNA QDSDSLSVST KEELGDDALA AEEGQSVLDE QEIEEALEED  60
   61 DTNYEEDIID DEESAQVDEE ELEEEEEEEE DATPEPVVTS KKNSRSKPKN GGASKRKASR 120
  121 RTVVDEDSEN LEGDEEDGSF SDLKDLYSNP MPAQTTPVSM RMTKRQRAIQ GILEEGEEDE 180
  181 LLELPPETSG RKKLTPEEMA LRRIENARRR KNQSERRLEE EKMETINRLL KRQSNTGKPR 240
  241 RGRAPNNPTS DSISRSKAVP KDRINMYQPF QCVRFKSTKE GSSLGVPEPL IRFFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] MSA 4.075995 View MSA. No confident structure predictions are available.
    2 View Details [155..295] Pfam 55.721246 No description for PF04795.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle