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Protein Overview: mrpl40

General Information:
Name(s) found: mrpl40 / SPAC4F8.02c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • mitochondrial ribosomal protein subunit L40 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 279 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial large ribosomal subunit [ISSLink to PubMed article]
    Biological Process: mitochondrial translation [RCALink to PubMed article]
    translation [ISSLink to PubMed article]
    Molecular Function: structural constituent of ribosome [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDLRKLIPR LRGPGTNVLK MKKPLPLHMR TKIREHLNKS DPTVKDDKSA KPELPFGKPA  60
   61 DRVPFWHIFK GDYVYVHQGP LKGKWGRVVE TNKYTNGITI EGVNVRSVKV PIFLLRNKPE 120
  121 DNQDPVIDIA HEVHYANVRL LAHAKTDAGE PVLIPVKLKK HSSTNLRSII RPNIEGVQIH 180
  181 TIHLPRPKTE DKPKDPEGKL DTKNPVVSKV TWSPSLSEPP LPPFAIGDLR ANWSRRLDRI 240
  241 WGYKKNNDDF TEIAKDLVRA ETAAEDLIKK PISPNTYSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] PSI-BLAST 25.045757 No description for 1vsaS was found.
    2 View Details [177..279] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle