YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPAC57A7.07c

General Information:
Name(s) found: SPAC57A7.07c [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • homocysteine methyltransferase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 308 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    Biological Process: sulfur amino acid metabolic process [ISSLink to PubMed article]
    cysteine metabolic process [RCALink to PubMed article]
    Molecular Function: homocysteine S-methyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMLDGGSTA ILPKLPESIS ESRLWTSEAL VRYPEIVVKH HEEFLKVCDI ISTFTYQLDA  60
   61 SIYDEKVEGV PLKQVYANSI GLPVYAREHL GLPNKYIALC LGSHAATIPG CMEYKMIYDK 120
  121 PTDFEMLYNF HKNRIEAIQA SNPKAFEKID FIAFESLPHV TEAEVVCQLI QDMKGWSKRC 180
  181 WITCTCPERS TIERVSSIIS KILSINHDSI WGIGVNCFHL SLLEPIAKML SSLLPSNITA 240
  241 ILYPDGRGLY QNPDGTFSPG STDHPAPSPE EWSTITAKYS NLHNGNLILG GCCETNYNHL 300
  301 SLLREKTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..308] PSI-BLAST 71.045757 Cobalamin-dependent methionine synthase (MetH) from Thermotoga maritima (Oxidized, Monoclinic)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • S-methyltransferase activity
    		•  3.53817178180686 bayes_pls_golite062009
  • homocysteine S-methyltransferase activity
    		•  2.53321380120921 bayes_pls_golite062009
  • catalytic activity
    		•  1.41033217274476 bayes_pls_golite062009
  • transferase activity
    		•  0.499011632852061 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle