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Protein Overview: rrn10

General Information:
Name(s) found: rrn10 / SPAC22E12.08 [Sanger Pombe]
Description(s) found:
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  • pir||T38165 hypothetical protein SPAC22E12.08 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|19115746|ref|NP_594834.1| RNA polymerase I upstream activation factor complex subunit Rrn10 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|1723521|sp|Q10360.1|RRN10_SCHPO RecName: Full=RNA polymerase I-specific transcription initiation factor rrn10 [NCBI NR]
  • gi|1220283|emb|CAA93895.1| RNA polymerase I upstream activation factor complex subunit Rrn10 [Schizosaccharomyces pombe] [NCBI NR]
  • RNA polymerase I upstream activation factor complex subunit Rrn10 [Sanger Pombe]
  • Hypothetical protein C22E12.08 in chromosome I - Schizosaccharomyces pombe (Fission yeast) [Swiss-Prot]
  • RNA polymerase I-specific transcription initiation factor rrn10 OS=Schizosaccharomyces pombe GN=rrn10 PE=1 SV=1 [Swiss-Prot]
  • VERY HYPOTHETICAL PROTEIN: Q10360; [pompepVF.fasta]
  • Hypothetical protein C22E12.08 in chromosome I [pompep4896]
  • |rrn10||upstream activation factor complex [pompepnew.fasta]
  • |rrn10||RNA polymerase I upstream activation factor complex|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • very hypothetical protein [Schizosaccharomyces pombe]gi|1220283|emb|CAA93895.1| SPAC22E12.08 [Schizosaccharomyces pombe]gi|1723521|sp|Q10360|YDB8_SCHPO Hypothetical protein C22E12.08 in chromosome Igi|7490944|pir||T38165 hypothetical protein SPAC22E12. [nrdb_11152004_Chlamydomonas]
  • (Q10360) Hypothetical protein C22E12.08 in chromosome I [pompep4896_normal_reversed]
  • |rrn10||RNA polymerase I upstream activation factor complex |Schizosaccharomyces pombe|chr 1|||Manual [pombe030305.revfasta]
  • |rrn10||RNA polymerase I upstream activation factor complex subunit Rrn10|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPAC22E12.08 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC22E12.08 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • RNA polymerase I-specific transcription initiation factor rrn10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rrn10 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 97 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    RNA polymerase I upstream activating factor complex [TASLink to PubMed article]
    nucleolus [IDALink to PubMed article]
    Biological Process: transcription from RNA polymerase I promoter [IMPLink to PubMed article]
    regulation of transcription [ICLink to PubMed article]
    Molecular Function: RNA polymerase I transcription factor activity [IDALink to PubMed article]
    rDNA binding [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNPPTRPTL YNLVNADGEL SYRARDLVQD FSVPIPHELP DPDLVHSIQD FATEYMLATG  60
   61 KKSFECLDES ALLGLGYLVT EWMDAMVTDC LEEFEER

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..97] Pfam 68.107905 No description for PF05234.2 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle