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Protein Overview: SPAC4G9.19

General Information:
Name(s) found: SPAC4G9.19 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • DNAJ domain protein DNAJB family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 270 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: ER-associated protein catabolic process [ISSLink to PubMed article]
    protein folding [RCALink to PubMed article]
    Molecular Function: Hsp70 protein binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKIFFRLNL VRNSLWRRAA SFTSYSELKS LTPYEILELP RTCTANDIKR KYIELVKKHH  60
   61 PDKMKNASQL APTESPPEIN KHNEEYFRLL LAANALLSDK RRREEYDRFG IHWNQPSHPT 120
  121 HPSPQNWSQA RYPTYSRSRR SAGMGSWEEY YYNSYDYMND QNASNKNRKF DDEGMLVFAG 180
  181 ILSILVIINI YSNYRNGKFY REARSAAIGR AEDNFDYYST GMADLSKDDR ISRFLILREQ 240
  241 SKQIPTQQKP SSLPPPERAL PAPTMPTPSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] PSI-BLAST 22.30103 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    2 View Details [162..270] MSA 2.251996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.13718430696516 bayes_pls_golite062009
  • protein binding
    		•  0.657362990040921 bayes_pls_golite062009
  • catalytic activity
    		•  0.106988907594358 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.32

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle