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Protein Overview: SPBC17D1.04

General Information:
Name(s) found: SPBC17D1.04 [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • sequence orphan [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 250 amino acids

    Gene Ontology:
    Cellular Component: spindle pole body [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    RNA polymerase I upstream activating factor complex [IDALink to PubMed article]
    nucleolus [IDALink to PubMed article]
    Biological Process: transcription from RNA polymerase I promoter [ISS]
    protein localization to nucleolar rDNA repeats [IMPLink to PubMed article]
    cellular protein localization [IGILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDSEEELEQ QGSQEDISSS QDTSDEKEMR KQDALYAQLI EYREIVSELR RSEMKNLCIQ  60
   61 LYCSYKAGIT RRNELQSDLD GYERRIPPRL RAVWPTIHSI PDESFFDGTS ASRFRQEAAY 120
  121 LAVRLASKKL HKLGRMASSE ELPNPDGLRY LVERLQIKLE RLFDSVDTFR QEQGSKSMQS 180
  181 RVKPMDWKIL YGLARVTNGS FSSSQKADVL ALGNGTRACQ SLFKEMSLQP SIDIEKVSHS 240
  241 NPEISIEFED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..250] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle