General Information: |
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Name(s) found: |
SPBC3D6.12
[Sanger Pombe]
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Description(s) found:
Found 18 descriptions. SHOW ALL |
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Organism: | Schizosaccharomyces pombe |
Length: | 922 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IDA]
small-subunit processome [IEA] cytosol [IDA] protein complex [RCA] small nucleolar ribonucleoprotein complex [ISS] |
Biological Process: |
maturation of SSU-rRNA
[ISS]
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Molecular Function: |
snoRNA binding
[ISS]
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Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MVKSYTRYEP TEFFGVIASS GCNILGQPSS SAKSVGRAIV GGLESVLEWD LKTGQLLSKW 60 61 KDSDCSAKVT CIANFDEMYA VGYADGSIRL WKDGELLITL NGHKSAVTTM DFDKMGTRLA 120 121 SGSMDTDIIV WDIVAETGLF RLRGHKDQIT KLLFITPPSK NTAEETVVDT DIDSGDMDVD 180 181 SKSSDSFLLS VGKDSFMKLW DLSIQHCVET HVDHQGEIWA MCVSPDAKRC LTAGTGSDVK 240 241 VWEISFPDDN NFTPTTKAFQ QLGTFTRQSR DRPITLAYDV SNRYVVFQAH DRLLEVFRLR 300 301 SSAELEKILN RRRRRKKSED VSITLKDEYE PFALIRTTAR ASSVAWIPGN RTPTLVTSLQ 360 361 NNSIEVYALD VKSEGSAAPL TERASRISAI EIPGHRADVR TLALSANHDV ILSGANGSLK 420 421 LWNKKTTSCI RTIECGYVLA ASFINNDKCI VSAYKSGELE VYDIASSSLI ERIQAHDGAI 480 481 WDLAVGHDGT YFATASADHT VKLWSLKSSF DFVPGTTRKV TTLKLEQTRQ IDFTDDVLAV 540 541 KISPDGRFVA ASLLDNTVKV YYLDSLKFFL NLYGHKLPVL SMDISYDSKL LVTCSADKNV 600 601 KIWGLDFGDC HKSIFAHQDS IMEVTFQPDT YNFFTCSKDR EVRYWDGKSF DLILKLRGHH 660 661 SEVWALAVGP TFVVSGSHDH SIRLWEQGDD LVFLEEERER ELEEQYESTL VSSYENAEAD 720 721 GEVKDGDVAA VTKQTIESLK DGEKILEAIT IGIEDLDQEI QYRLDLLKSP GKARGPRNPI 780 781 LAHLGVSAEE YVLNTFKKIR SSHLDDALLV LPFEHVLSLF RFIDIWASRK WSIPLVSRII 840 841 FFLLRTYHRQ LTTTVKMRPL LNNIRSSLRG SLQEERSLIG YNAAGLSYLR HEWELTHNTS 900 901 LEDIDSTSLE VDGKKRAFSN IV |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..301] | 52.09691 | Homology Model of Yeast RACK1 Protein fitted into 11.7A cryo-EM map of Yeast 80S Ribosome | |
2 | View Details | [302..446] | 72.69897 | No description for 2gnqA was found. | |
3 | View Details | [447..805] | 67.09691 | No description for 2ovpB was found. | |
4 | View Details | [806..922] | N/A | No confident structure predictions are available. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.81 |
Source: Reynolds et al. (2008)