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Protein Overview: SPAC4H3.13

General Information:
Name(s) found: SPAC4H3.13 [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • transcription factor Pcc1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 88 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nuclear chromatin [ISSLink to PubMed article]
    EKC/KEOPS protein complex [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: positive regulation of transcription from RNA polymerase II promoter by pheromones [ISSLink to PubMed article]
    mating projection assembly [ISSLink to PubMed article]
    gene-specific transcription from RNA polymerase II promoter [IC]
    Molecular Function: chromatin DNA binding [ISSLink to PubMed article]
    transcription regulator activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEMIVLPHK VTVKVPLASR VDAERCLQVL APDRELKEEL VQRNLFVDDN YLVVNYSCSS  60
   61 ARMTRVTVNS LFENLYLIID TMHELSSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] Pfam 37.60206 No description for PF09341.1 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle