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Protein Overview: chr3

General Information:
Name(s) found: chr3 / SPAC24B11.10c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • chitin synthase regulatory factor Chr3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 932 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cell division site [IDALink to PubMed article]
    cell tip [IDALink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: regulation of ascospore wall chitin biosynthetic process [TASLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDSHSSRRK YEKEKLVFAT NNGKRTEGTP AFLKSGNTAS SSSPTLQFRP TSRYPTLSHE  60
   61 PVYTNVLDLS SRIDANRASI MSATMGTPPS ALKFSKKKIS RPVVSEDTFK DKLPRATIPV 120
  121 KPEPQPQYKI PAAPAPTSKR VVNRGLKLNT NLRQASPILP SPSLKLDRQD APIQINHEQK 180
  181 EDFLVSIPRP TPMTNLDDGK DEIGQPDPHR KYMAPPRVNS ISRVQRRMSY IPYGGFDDFL 240
  241 DNYYKDDDTV LEDNQLKSNS RIETLEEEDG AESDSITNTV SNASSDAEPA HRHLGPVYEN 300
  301 SGHLPSKSHF SSTDSNTDSF GLESDERSLP SVSNDLKSSE TLKNPRNDDL LTLQQPPRYP 360
  361 HSQMVMLPAR SPVEVPAPTF DRRNVSRNSN NNSPEGYDNN RTNPTVNNLP SYPTNLARPK 420
  421 AIKPMPTSIH GQTSPLSPIP PVHTTHGLVS DIRPLPSVSS PIMRADSTPI SHNLAVTPSF 480
  481 SPIPQQSNKS IGNHKNTSVA NVSSKVANSK FERNISMMSN SNASSPAIFE VGAEAKEKTK 540
  541 DAIPCHPDDK LMIPSPKIVT HGDAMQEEQR LRQKSQITPD DEVELAKVYL NALETLENKP 600
  601 SLAPDQASYN TRINVYRTRA VELLKKNAYP SKTQNTVPEA LFLIGQFHSQ GVLGFRRDLG 660
  661 KAFELYSLAA KKGHPLSNYR VAVCLQTGTG VKPDTSKCVA IYKKAAEMDV VEAMFRIALI 720
  721 YLNGLLGQKR NISLGVQWLE RACKSKGPES VRAMYELAKI YEQPDRYGVS ATPERKFELY 780
  781 KQSAVYGYAA AQCKLGECYE HGLLGCLAEP RRSIFWYTRA AEQDYGEAEL GLSGWYLTGS 840
  841 EGILPKNGEE ALLWAHKAAC KGLAKAQYAV GFMMEQGIGV AADPSSAHNW YIRAAKQGFP 900
  901 KAKKRLEEQA LSSKQTHSKA PKKKQQEQCV VM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] FFAS03 0.983 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
    2 View Details [173..306] MSA 4.254993 View MSA. No confident structure predictions are available.
    3 View Details [307..518] MSA 2.245992 View MSA. No confident structure predictions are available.
    4 View Details [519..618] deduced N/A No confident structure predictions are available.
    5 View Details [619..932] PSI-BLAST 67.69897 Helicobacter cysteine rich protein C (HcpC)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5
    Term Confidence Notes
  • binding
    		•  1.96958278583621 bayes_pls_golite062009
  • protein binding
    		•  0.559882636047776 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle