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Protein Overview: SPAC12G12.11c

General Information:
Name(s) found: SPAC12G12.11c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • DUF544 family protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 365 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNVQEHDPD TQEHNNETQN HKQEDHSNSY QTRTIPFIEP LSREYQKRII LCQTVNGPCP  60
   61 IIALSNALIL KSNVDRPFEL PKKRYITPDE LTEYLVEFAK AYGLCKNQQS LQDKLTSMHF 120
  121 GQQLNPCLYD IEKFEYGHEI FCTFGVRLVH GWILSDDMGL SDEDLSYLRK LEYYEKVADT 180
  181 FAERRSLLEM QEPLTEQQQD FLNNSTCVDK VMENRYTMQF LTNAGLKKIL ELVGPGEIVV 240
  241 VFRSSHFSTM YSNPDSFAQF TLVTDSGYAR TGEDVVWETF DSQTVETGNG ELCAANFIPA 300
  301 VYVLNQRKEE KKKRAKDDEQ YAKRLAKEEE ERGKKETPKK ASNTPRRNKS NTQKSRKQSE 360
  361 NCLIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..200] Pfam 55.79588 No description for PF04424.4 was found. No confident structure predictions are available.
    2 View Details [201..365] MSA 2.043985 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle