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View Structure Prediction Details

Protein: SPAC12G12.11c
Organism: Schizosaccharomyces pombe
Length: 365 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC12G12.11c.

Description E-value Query
Range
Subject
Range
gi|114559562 - gi|114559562|ref|XP_524866.2| PREDICTED: similar to KIAA1390 protein [Pan troglodytes]
375.0 [0..10] [334..261]
gi|7243161 - gi|7243161|dbj|BAA92628.1| KIAA1390 protein [Homo sapiens]
370.0 [0..10] [334..125]
FA63A_PONAB - Protein FAM63A OS=Pongo abelii GN=FAM63A PE=2 SV=1
gi|55731155 - gi|55731155|emb|CAH92292.1| hypothetical protein [Pongo abelii]
366.0 [0..10] [334..89]
gi|67902160, gi|... - gi|67902160|ref|XP_681336.1| hypothetical protein AN8067.2 [Aspergillus nidulans FGSC A4], ref|XP_41...
363.0 [0..6] [361..371]
gi|24981080 - gi|24981080|gb|AAH39762.1| Fam63a protein [Mus musculus]
358.0 [0..10] [325..26]
gi|68363548 - gi|68363548|ref|XP_698926.1| PREDICTED: hypothetical protein [Danio rerio]
356.0 [0..29] [330..235]
gi|47230396 - gi|47230396|emb|CAF99589.1| unnamed protein product [Tetraodon nigroviridis]
354.0 [0..13] [333..228]

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Predicted Domain #1
Region A:
Residues: [1-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNVQEHDPD TQEHNNETQN HKQEDHSNSY QTRTIPFIEP LSREYQKRII LCQTVNGPCP  60
   61 IIALSNALIL KSNVDRPFEL PKKRYITPDE LTEYLVEFAK AYGLCKNQQS LQDKLTSMHF 120
  121 GQQLNPCLYD IEKFEYGHEI FCTFGVRLVH GWILSDDMGL SDEDLSYLRK LEYYEKVADT 180
  181 FAERRSLLEM QEPLTEQQQD 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 55.79588
Match: PF04424.4
Description: No description for PF04424.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [201-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FLNNSTCVDK VMENRYTMQF LTNAGLKKIL ELVGPGEIVV VFRSSHFSTM YSNPDSFAQF  60
   61 TLVTDSGYAR TGEDVVWETF DSQTVETGNG ELCAANFIPA VYVLNQRKEE KKKRAKDDEQ 120
  121 YAKRLAKEEE ERGKKETPKK ASNTPRRNKS NTQKSRKQSE NCLIS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle