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Protein Overview: SPAC4G8.04

General Information:
Name(s) found: SPAC4G8.04 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • GTPase activating protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 772 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: vesicle-mediated transport [RCALink to PubMed article]
    regulation of Rab GTPase activity [IEA]
    Molecular Function: Rab GTPase activator activity [IEA]
    GTPase activator activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPSVSDSSV YLSSAPTKPI ASGSVATGID SMPSKVDITP CDLLENSKSS APLFVECNQE  60
   61 SLHSIPGSLH LVPDASIERL IEKHGAVNLL RQLAKDVAER DSFISDLKFH FESREYVFRE 120
  121 LLREHGLDPV LANTKLSQRH SASFFPSSQE PSIPENPSSL TGEKPHLYAR IDSAINEPFT 180
  181 PSDRLSPSSL VPLLKLPALD HAVSSSSSSD LPSDPNSASY IASSKQKASS LKLTSSLKKF 240
  241 YSWTSSSSLQ HTRENLHDST SSLRDHDPSL LSSSKFFRSS PRCSTPSVSS TFVSATSEPE 300
  301 VETYSVSTKN SSSNKNLRSS LSKLLSTSNL NNKPLSLSST APSMPSIGSV ELGNMIPKET 360
  361 QPPSMRNDWK DYLDNNSKEI LDQFGFLQKR PSHDTPLCPE DIKLNQKQTL SFYESNYGLV 420
  421 DDFFGNELDG LNDSPLLLNK KDILLDMKES TRQKNWSLFF QRLYKKYKIT DEDTIGLLGI 480
  481 SSIGVKGRHG KKRWHKFREL VKNGVPLCYK AKVWLECSGA YQLHSPGYYE ELLSRTDEVE 540
  541 SASVAQIDMD INRTMAKNVF FGGKGPGIPK LRRILVAYSR HNPHIGYCQG MNVIGAFLLL 600
  601 LYASEEDAFY MLMSIIENVL PPKYFTPDLM TSRADQLVLK SFVKESLPEI YSHLELLGVD 660
  661 LDAISFHWFL SVYTDTLPTN ISFRIFDMLF CDGYVCLFRV ALTILKSLKQ QILACNSSSA 720
  721 IYSFLSDLVQ YSFQPDSFIK EAADRWSKLV TEKSIERKRN LAISSLNLAV NY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run spc19 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] MSA 2.303996 View MSA. No confident structure predictions are available.
    2 View Details [173..311] MSA 3.372996 View MSA. No confident structure predictions are available.
    3 View Details [312..414] deduced N/A No confident structure predictions are available.
    4 View Details [415..772] PSI-BLAST 78.221849 No description for 2qq8A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle