YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPAC31A2.14

General Information:
Name(s) found: SPAC31A2.14 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • WD repeat protein, human WRDR48 family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 962 amino acids

    Gene Ontology:
    Cellular Component: cell division site [IDALink to PubMed articleLink to PubMed article]
    cell tip [IDALink to PubMed article]
    cell cortex of cell tip [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    protein complex [RCALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVRKRYKVT YVLDSCNDQL GHRLDANCLV LGRYFSEQGS APVTRALYSG GRDGQLFGWD  60
   61 IGYDYGKASQ PLAKIQAHSA WVNDIALTHD SEGVISCSSD STVKLWKPHV LNASCLSTIG 120
  121 EHTDYVKRVS IPKYSKSPLV ASGGLDKRII VWDYNVGQEV MRFEQLPDCS LVVGPRSGVY 180
  181 SLAANNNIIA NGGLQKDIQL WDCVSKKRIT DLVGHTDNVR DILISDDGRT ILTASSDATI 240
  241 KLWSLRAQKC LFSFIAHSDS VWALYSEHPD LKVFYAGDRS GLITRTDIRN QPNNQSCTAI 300
  301 CKQDAPVSDI VARQSFIWST SRDGSILRWK DEPLFNQDVG AALSKHTSSH LSVSSDCPSR 360
  361 HSSDIRNHSC PTLYHDDAED IYYDLHHTES YSNINLTKTP DYVIHGGIGL LKYRMLGDRR 420
  421 HVLTEDAVGN KCLWDILACK QAGEFDKSED FEKIVQSLDT VQAIPRWASV NCLLGILAVT 480
  481 LDENHYMDAE IYADECPLLK VDSPSDKRIN LGVWILKNLF REFIDAELHR DLKFRQNLDV 540
  541 VRSEAKKQIE AQREEARKGN VNMPSALSPL RIRSRPSPLS LPPEPLLSPT IDYSATPFPL 600
  601 EPPPESPGPS LQIPSNNPVY TNLTDTDSMM GAPDYFSIPA RQNRNRKPHT EVVGSPTVVR 660
  661 TKEIIPPKVT REGSFMGRLK KLGRSKSSKS LQTDFMKASV ERAASSRVFS TGTSVTSPQA 720
  721 LSKTNNTVNN AANTENNTLA KDKQQTSEAS SPGTPRELKT TGELIEDLHE QYVHFKDKDT 780
  781 VLSLMKPPND DTFPMLNLSS QITVIISEES PEAGNSRDIY RSTLENMADD IDLLENIMPF 840
  841 WLGRLLLLNE FPSKTAPTVN FTLQPFPGSG LPLIVNENTR LSASAMLRAQ KIMDYSYSKL 900
  901 SQQRKDVSSL QFRCKDVVVT PKMTLATVKA RIWRSGDDVV FHYDVAPRSV SEIVDKTQSL 960
  961 NI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] PSI-BLAST 75.045757 No description for 2ovpB was found.
    2 View Details [78..494] PSI-BLAST 27.522879 Actin interacting protein 1
    3 View Details [495..621] PSI-BLAST 9.39794 Surface layer protein
    4 View Details [622..688] deduced N/A No confident structure predictions are available.
    5 View Details [689..810] deduced N/A No confident structure predictions are available.
    6 View Details [811..901] deduced N/A No confident structure predictions are available.
    7 View Details [902..962] MSA 1.017994 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.407313201902664 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.170768448541485 bayes_pls_golite062009
  • protein binding
    		•  0.0109071915022965 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  0.279064709535885 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle